bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-41_CDS_annotation_glimmer3.pl_2_1

Length=131
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              48.5    9e-05


> 888743.HMPREF9141_0985
Length=531

 Score = 48.5 bits (114),  Expect = 9e-05, Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 11/102 (11%)

Query  40   LGKQPSWIEYTTDVNETYGDFAAGMPLAFMCLNRVYE-----ENSDHTIAN-----ASTY  89
            LG Q  + EY T  +  +G+F +G+ L++ C  R Y+     +  D  + N     A  Y
Sbjct  431  LGWQVRYNEYKTSRDLVFGEFESGLSLSYWCSPR-YDFGFDGKAGDKKLVNSPWSPAHFY  489

Query  90   IDPTIYNKIFAESRLSSQNFWVQVAFDVTARRVMSAKQIPNL  131
            ++P+I N IF  S + + +F V   FDV A R MS   +  L
Sbjct  490  VNPSILNTIFLVSAVKADHFLVNSFFDVKAVRPMSVSGLAGL  531



Lambda      K        H        a         alpha
   0.317    0.130    0.388    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 124768809920