bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-5_CDS_annotation_glimmer3.pl_2_6

Length=579
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              84.7    1e-14


> 585502.HMPREF0645_1835
Length=553

 Score = 84.7 bits (208),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 167/420 (40%), Gaps = 59/420 (14%)

Query  168  ISAYSFRAYEGIYNAYIRDNRNNPYYVNGQVQYNKWIP-TYDGGADQNIYELRYANWEKD  226
             S +   AY  IY  Y R N N   +      ++K+     D     ++++LRY N + D
Sbjct  184  CSVFRILAYNKIYQDYYR-NSNYENFDTDSFNFDKFKGGLVDAKVVADLFKLRYRNAQTD  242

Query  227  FLTTAVQSPQQGTAPLVGITTYTETVETTSDDGTPVTRELSRIALVDEDGKKY-QVSFDS  285
            + T   QS       L   TT  E V+  +         ++    V  DG  + +V+F  
Sbjct  243  YFTNLRQSQ------LFSFTTAFEDVDNIN---------IAPRDYVKSDGSNFTRVNFGV  287

Query  286  DSEGLKGVSYVELDNEVKLRQPRNLIDVVTSGISINDLRNVNAYQKFLELNMRKGYSYRD  345
            D++  +G                          S++ LR   A  K L + MR G +++D
Sbjct  288  DTDSSEG------------------------DFSVSSLRAAFAVDKLLSVTMRAGKTFQD  323

Query  346  IIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDGSQTYAKALGSQSGIAGV  405
             +   + V++         + GGF  D+++  ++QT       +  Y    G    +AG 
Sbjct  324  QMRAHYGVEIPDSRDGRVNYLGGFDSDMQVSDVTQTSGT---TATEYKPEAGYLGRVAGK  380

Query  406  RGDSGRALECF-CDEESIVMGILIVTPLPVY--TQLLPKHFTYRGLLDHYQPEFNHIGFQ  462
               SGR    F   E  ++M I  + P   Y  T+L P         D++ PEF ++G Q
Sbjct  381  GTGSGRGRIVFDAKEHGVLMCIYSLVPQIQYDCTRLDPM-VDKLDRFDYFTPEFENLGMQ  439

Query  463  PILYKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTN--LSNFLMHRV--  518
            P+    +          D  + V GY   + EY    D  HG F  +  LS++ + R   
Sbjct  440  PLNSSYISSFCT----TDPKNPVLGYQPRYSEYKTALDVNHGQFAQSDALSSWSVSRFRR  495

Query  519  FNQKPQLAQSFLVIDPAQVTDVFAVTKADDGTELADKIYGQIWFDCTAKLPISRVAIPRL  578
            +   PQL  +   IDP  +  +F V    +GTE  D +YG   F+      +S   +PR+
Sbjct  496  WTTFPQLEIADFKIDPGCLNSIFPVDY--NGTEANDCVYGGCNFNIVKVSDMSVDGMPRV  553



Lambda      K        H        a         alpha
   0.319    0.137    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1282750120960