bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-6_CDS_annotation_glimmer3.pl_2_3

Length=357
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  469590.BSCG_01611                                                     372   9e-124


> 469590.BSCG_01611
Length=381

 Score =   372 bits (954),  Expect = 9e-124, Method: Compositional matrix adjust.
 Identities = 195/330 (59%), Positives = 253/330 (77%), Gaps = 9/330 (3%)

Query  34   IAQQNNAFNEKMLQKQMDYNTQMYQQQLGDQWQFYNDAKQNSWDMFNAANDYNSASAQRE  93
            IAQ NN FNE+MLQKQMDYNT  Y QQ+ DQW FYNDAKQN+WDMFNA N+YNSASAQRE
Sbjct  41   IAQMNNEFNERMLQKQMDYNTLAYDQQVSDQWSFYNDAKQNAWDMFNATNEYNSASAQRE  100

Query  94   RLEAAGLNPYLMMSGGNAGTATAQSSPQASSPSAQGVTPPTATPYSADYSGITQGLGMVL  153
            R EAAGLNPY+MM+ G+AGTA A S+  A++P+ QG+TPPTA+PYSADYSGI QGLG  +
Sbjct  101  RYEAAGLNPYVMMNTGSAGTAAATSATSATAPTKQGITPPTASPYSADYSGIMQGLGQAI  160

Query  154  DKIATQPDRDVKSAEADNLRIEGKYKAAKTIAEIVQMRTNAKTQEGRLALDKLIYSIDKD  213
            D++++ PD+    AE  NL+IEGKYKAA+ IA I  ++ +  +++ ++AL+KL+YSI KD
Sbjct  161  DQLSSIPDKAKTIAETGNLKIEGKYKAAEAIARIANIKADTHSKKEQVALNKLMYSIQKD  220

Query  214  LKSSQMDVNRESIANMQAERKLTNVQTLLVDKQLSWMDAQSKMDLAQKAADIQLKYAQGA  273
            L SS M VN ++IANM+AE K  N+QTL+ DKQLS+MDA  KM+LA+KAA+IQLK AQGA
Sbjct  221  LASSTMAVNSQNIANMRAEEKFKNIQTLIADKQLSFMDATQKMELAEKAANIQLKLAQGA  280

Query  274  LTRKQVDHEIAKIAETEVRTSLDIQEQTTNVLKQQ--------GMRQENSFNEATFDNRV  325
            LTR Q  HEI KI+ETE RT+L I EQT+  ++Q           RQ+N F+  T++ RV
Sbjct  281  LTRNQAAHEIKKISETEARTTL-INEQTSLTIEQNTGQQLQNQAQRQQNRFDADTYNVRV  339

Query  326  KSVKESLWNLMHEADSYGLSKTIGRVIRPL  355
            K+++ESL+N++ E D  G  KT+G+ IR +
Sbjct  340  KTLEESLFNIVFETDKLGAVKTVGKGIRAV  369



Lambda      K        H        a         alpha
   0.310    0.123    0.334    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 657515010530