FEATURES             Location/Qualifiers
     gene            complement(162..1199)
                     /locus_tag="Alpa_01"
     CDS             complement(162..1199)
                     /product="putative replication initiation protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MCLYPKLIPNKRYLPTKKNGGVPPVCPDERLRYVTAACGDCYECRKQKQRQWVVRMSEENRQTPNAYFLTLTIDDKSYKQLKQKYKLKDNNDIATKAIRLCLERVRKLTGKSVKHWFITELGHEKTERLHLHGIVWGLGNGEKITNNWKYGITFTGYFVNEKTINYITKYMLKIDEKHPKFRGKVLCSAGIGSGYLKREDAKRHVYIPGKTNESYRMKNGGKLNLPIYYRNKIFTEEEREKLFLDKIEKGIVYVLGSKIDLKTEESRYMGVLLSERERCERLYHDSPKDWDKRKYLNRLKKQRQWIESKATKVAEKERKKEERSEKRLNNDIDLFANLYFNQNYT"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_022044634.1"
                     /inference="similar to AA sequence:INSD:CDN73649.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1202..2239)
                     /locus_tag="Alpa_02"
     CDS             complement(1202..2239)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MIGAIMGIGGTLMGALNANSASNQSWQRQHQLMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYGMGGQGGSTQGAGIANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGVDTEAQQATIDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEETRWNVKNLKKGIDKLTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQAKAIPTRILQGWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVLGMLEIASKGAGAALGAKVGKTGFQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:MV_prot:putative.gpH"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2400..2717)
                     /locus_tag="Alpa_03"
     CDS             complement(2400..2717)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MKYSKPTKNNGRLESVEIYEGESIETKCARVLENGEPITDTAPIIYTAKEDGVLPAYNIRTDRFDIAMDAYDKITRNSAKKEIAPKPEDFGNVPNKTDGGSPSEN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2731..4665)
                     /locus_tag="Alpa_04"
     CDS             complement(2731..4665)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MAIQKNIGKNTIGDNNKMSVSLHEYNMSTHDLSTIVRNTQSPGTLVPNLCLVAQKGDTFDIDIDSNVLTHPTTGPLFGSFKLEHHVYTGPVRLYNSWLHNNRTKIGLNMEKVKLPQLKVNITTLSDTPSNEEKQWVQVNPSCLLAYLGIRGYANTPNSGAGVINKNALPILTYFDIFKNYYANTQEENFYMIGTSPKLSVNINGIVVNNPDDIVESQGSINPTSTIKIVTTGIKEDNIKLIVKQNQYGRTVTMTPEELGDAEVASNTLTIKTTNIPTGGTWFVRSVYSTQRTSLEKYPLENLDTIRDKILLTPGDTVFDISNASMSVEPFTNFAKRNPQSVLNTSFTQYGLCLKTYNSDVYQNWINTEWIEGVTGINEASAVDVTDGKLSMDALNLAQKVYNFLNRIAISGGTYRDWLETVYTGGNYMERCETPMFEGGVSQEIVFQEVISNSASQEEPLGTLAGRGVTTGRQKGGHIRIKVTEPCYIMCICSITPRIDYGQGNTWDTYLETMDDWHKPALDGIGYQDSLNGERAWWTDHIASNGGSLTKTAAGKTVAWINYMTNVNRTFGNFAPEMPESFMVLNRNYSMNNNGQIEDLTTYIDPVKFNYIFADTNLDAMNFWVQTKFDIKVRRLISAKQIPNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_005867318.1"
                     /inference="similar to AA sequence:INSD:WP_022044635.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4669..4950)
                     /locus_tag="Alpa_05"
     CDS             complement(4669..4950)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MEQEFNDMKDVFKVLPTTQEEKEYMIVIGKHLATTEKFPTREAAEEKINSVDWNLIAAMIYACKEADEYEKKLKRSAKKVTKKIINDAKKKEG"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4992..5141)
                     /locus_tag="Alpa_06"
     CDS             complement(4992..5141)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MGGNYPSYQYGNHCYNYDLMCAVVYNEPIRKQKQSKLNAKDRTNNNVKR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5163..5339)
                     /locus_tag="Alpa_07"
     CDS             complement(5163..5339)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="VYFNTPIKMKKICYELDEDVITKKYSFTKQERRLICEKTFDKDEQNAKIWKQRQLKLW"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5395..5595)
                     /locus_tag="Alpa_08"
     CDS             complement(5395..5595)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_08"
                     /translation="MAATKFTAIYVNNEKKMIEREIPGMNTYKIAEKFAKILNDPEETKLVCVIESWKLYPKEDEKTEKN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gcacgtcact ccttatcccg gtcttaaggt agctgtttct cggataaagg tgtacctcac 
       61 cctcccgtta tacacctaag cctcccggcg tttgaggtga taaatacaga cccgtgtgat 
      121 gttaacacgg aaccctgttg gacgtgcccg tacgtggtcc tttacgtata gttttgattg 
      181 aaatatagat tggcgaatag atcaatgtcg ttatttaatc gtttttcact tctttcttct 
      241 tttttccttt ccttctcggc gaccttagtc gctttagatt ctatccattg tctttgcttt 
      301 ttgagtctgt tgagatattt tcttttatcc caatcctttg gactatcgtg atacagtctt 
      361 tcgcagcgtt ctcgctcgct taggagtacg cccatgtatc ttgactcttc cgtttttagg 
      421 tctattttac tgcctagtac gtatactatt cctttttcaa ttttgtctag gaatagtttt 
      481 tcacgctctt cttctgtaaa gattttgttt ctataataga ttggtagatt gagttttcca 
      541 ccgtttttca ttcgataaga ttcgtttgtt ttgcctggga tatatacatg tcttttagca 
      601 tcctctcgct tgaggtatcc tgatcctatt ccagcggagc ataacacttt tcctctgaat 
      661 tttggatgtt tttcgtctat ttttaacatg tattttgtaa tgtaattgat tgttttttca 
      721 ttcacaaaat atccggtgaa tgtgattccg tatttccaat tgttcgttat tttctctcca 
      781 tttcccaaac cccatactat cccatgcaga tgcaatcttt ctgttttctc gtgtcctagt 
      841 tctgtaataa accagtgctt tacggatttt ccggttaatt ttcttactct ttctaagcat 
      901 agtcttatag cttttgttgc aatatcgtta ttatctttta atttgtattt ttgtttcagt 
      961 tgtttgtatg atttatcatc gattgttagt gtcagaaagt aggcgtttgg tgtttgtcta 
     1021 ttttcttctg acattcttac tacccattgt ctttgttttt gttttctgca ttcataacag 
     1081 tctccacatg ctgctgttac ataacgtagt ctttcgtcag gacaaacagg cggtactccg 
     1141 ccattctttt ttgttggtag gtaccgctta tttggtatga gtttaggata tagacacata 
     1201 attattgaaa acctgtttta cctacttttg ctcctagtgc cgcccctgct ccttttgaag 
     1261 ctatttcgag cattccaagt acaatgtctt tgatgagctt ttgttcttca atatctagac 
     1321 cttttttgcc tagttcgtat ctgtttatta catcttgtgc ataggtctcc atttgttctc 
     1381 tttgaacgat gagtgctttt ccttttttgg taagttcctc ccatccttgt agaattcgtg 
     1441 tcggaattgc ttttgcttgc tcttcgttga ctttttgttg acttccttta agtagtattt 
     1501 cggtcattag attttgaagc gttagagtgc tttctttgac tttgttgtcg atcgttcttt 
     1561 ttttgaggtt gttatcgagt tctactccgt caatttccgc tgttagtttg tcaattcctt 
     1621 ttttgaggtt tttaacattc catcgtgttt cctcggcttt ttcctttgtc caatctgcgg 
     1681 tatttctctt gagttcttct tcggcatctg ctactctgat ttgtcctaat agtagtcctc 
     1741 gttttgtttt ttcgtttgag gtttgtgcta tcaggttgtc aatggtagct tgctgtgctt 
     1801 ctgtatctac gcctttgatt ttatttgctt cggcttcgtt tttgttagct tggctttcgt 
     1861 taagtttaat ttggcttagt gcatttgcca tttctattcc gatttcctgt gctcttagac 
     1921 ccattcctac ggattggtct tgaggtagtc ctactccgtt tgctattcct gctccttgtg 
     1981 tcgaacctcc ttgtcctccc attccgtaga ttagtcctgg acttaatcct gcttctttta 
     2041 tgtgtttcat ttgattttca aagttggtgt aattccacat ttctttcgct tgccctgtgt 
     2101 tgaatttggc gttttttctg ttcaattcag cttgtatttc cattagttgg tgttgtcttt 
     2161 gccaactttg gttacttgca ctgtttgcat tgagtgcccc cattagggtt cctcctattc 
     2221 ccattattgc tcctatcata attatttaca ttttcgcgct ttgatgttca aagcgatatt 
     2281 catattactc gatattatat tgtaggtgcg tactttcgtg tattgtccgg taattaaatc 
     2341 ggacaatact ccgaagtgct tgttacctac aaggctttga aaataccttt tcaaacagtt 
     2401 tagttttcac ttggcgatcc tccgtctgtt ttattaggta catttccgaa atcttctggc 
     2461 ttaggtgcta tttccttttt tgccgaattt cttgtgattt tatcatatgc gtccatcgcg 
     2521 atatcgaatc tgtctgtacg gatattgtat gctggcagta ctccatcttc ttttgctgta 
     2581 tagattattg gcgcggtgtc tgtgattggt tcaccgtttt ctagcactct tgcgcatttt 
     2641 gtttcgatgc tttcgccttc ataaatttct acggattcta gtctcccgtt gttttttgtt 
     2701 ggttttgaat atttcataat gttataattt ttataagtta ggaatttgtt ttgcactgat 
     2761 tagacgtctt actttgatgt caaattttgt ttgtacccaa aagttcatag cgtctagatt 
     2821 tgtgtctgca aagatgtaat tgaattttac tgggtcaata taagttgtta aatcttctat 
     2881 ttgaccatta ttattcattg aataatttcg gttaagtacc atgaagcttt ccggcatttc 
     2941 tggcgcgaag ttaccaaatg ttctgtttac atttgtcatg tagtttatcc atgccacagt 
     3001 ttttccggct gctgtttttg ttaatgatcc tccgttggat gcgatgtggt ctgtccacca 
     3061 cgctctttct ccatttaatg aatcttggta tccgattcca tcaagtgctg gtttgtgcca 
     3121 atcatccata gtttctaggt atgtatccca tgtgttgccc tgtccgtagt cgatacgtgg 
     3181 tgtgattgag catatacaca ttatgtaaca tggttccgtt actttgattc ggatatgtcc 
     3241 gcctttttgc cttcctgtcg taacacctct tcctgctagt gttcctagtg gttcttcttg 
     3301 gcttgcactg ttgcttatta cttcttggaa tacgatttct tggcttacac ctccttcaaa 
     3361 cattggtgtt tcgcatctct ccatataatt accgcctgtg tatactgttt ccagccaatc 
     3421 tctataagta cctccgctta ttgcaattct atttaggaaa ttatatactt tttgtgctaa 
     3481 atttagtgcg tccatggata gtttgccgtc tgttacatcc actgcacttg cttcgttaat 
     3541 tccggttaca ccttctatcc attcggtatt gatccaattt tgatatacat cgctgttgta 
     3601 tgtttttagg catagtccgt attgtgtaaa ggatgtattt aaaacagatt gcggatttct 
     3661 cttcgcaaaa tttgtgaatg gttcaacgct catgcttgcg tttgatatgt caaatactgt 
     3721 atctcccggc gttagtagta ttttatctct gattgtatct aggttttcta gtggatattt 
     3781 ttccagagat gttctttgcg tcgagtatac gcttcttaca aaccatgttc ctccggttgg 
     3841 tatatttgtt gtttttatag ttaaggtgtt gcttgctacc tctgcatccc ctagttcttc 
     3901 cggagtcatt gtgactgttc ttccgtattg gttttgtttt actattaatt ttatattatc 
     3961 ttcttttatt cctgtcgtaa ctatctttat ggttgacgtt gggtttattg acccttggct 
     4021 ttctacaatg tcatctggat tatttactac tatgccatta atgtttactg atagttttgg 
     4081 agatgttcca atcatgtaga agttttcttc ttgtgtgttt gcgtagtaat ttttaaatat 
     4141 atcaaaatat gttaatatgg gtagcgcatt tttgtttatt actcctgctc cgctattggg 
     4201 cgtattagcg tatcctctga ttcctagata agctagcaag caacttggat ttacttgtac 
     4261 ccattgtttt tcctcatttg aaggagtatc tgataacgtt gttatattta cttttaattg 
     4321 tggtaatttt actttctcca tattcagtcc gatttttgtt cggttgttgt gtaaccaact 
     4381 gttgtacagt cttaccggtc ctgtgtacac atgatgttct agtttgaacg agccgaataa 
     4441 aggtcccgtt gttggatgtg taagcacatt tgaatcgatg tcaatgtcga atgtatctcc 
     4501 cttttgagct actaggcata gatttggaac tagtgttcct ggactttgtg tgtttcttac 
     4561 gattgttgat aaatcgtgtg tcgacatgtt atactcatgc agacttacgg acattttatt 
     4621 attatctcct atggtatttt taccaatgtt tttttgtatt gccatggttt agccctcctt 
     4681 ttttttagcg tcgttaataa ttttttttgt gacttttttt gcggagcgtt ttaatttttt 
     4741 ttcgtattcg tccgcttctt tgcaagcata aatcattgcc gcaattagat tccagtctac 
     4801 agagttgatt ttctcttctg ctgcttcacg tgttggaaat ttttctgttg ttgccaaatg 
     4861 ttttccaatt acgatcatgt attctttttc ttcttgtgtt gttggtaata ctttgaatac 
     4921 atctttcatg tcattaaatt cttgttccat ttttttaata gtttttagga ttaatattaa 
     4981 tatgtgtgct atcaacgctt gacgttgttg tttgttcggt cttttgcgtt gagttttgat 
     5041 tgtttttgct tacggatagg ctcattgtac acgactgcac acataaggtc gtaattatag 
     5101 caatgattgc cgtactgata gctcggataa tttccaccca ttgattacct gtgattttca 
     5161 tgttaccata attttaattg tctttgtttc caaatttttg cattttgttc atctttgtca 
     5221 aaagtttttt cgcatattaa ccttctttct tgttttgtga agctgtattt ttttgtaata 
     5281 acatcttcat ctagttcata acatattttc ttcattttta ttggtgtgtt gaagtacacg 
     5341 tagtttttta gttcctgaaa tgtattgaaa atatatccgt ctgcctcata ttttctaatt 
     5401 tttttcggtt ttttcatctt ctttaggata taatttccac gattctatta cacatactag 
     5461 tttggtttct tccggatcat ttagtatttt agcgaatttt tctgctattt tatacgtgtt 
     5521 catacccgga atttctcttt cgatcatttt tttctcgttg ttaacgtaga ttgctgtaaa 
     5581 ttttgttgct gccataattt ttggttttaa ttatttataa attgaagaat tttgatatat 
     5641 taggataatt tcttttgaaa taatttttgt ctatccattt tgattcttgt tttctaccat 
     5701 ctttactttt tagtattatg agtattcttt tacattcttt gaatctaatg tcaattactg 
     5761 aatgattttc taatagtttt tttaatgttt tcataattac ctccttgttt tttattacac 
     5821 tacaaatata cgtgtttttt ttgattccta caaattttct gatatttatt tttccgattt 
     5881 aacctctatt aacaatagta tctttgagcc tccgtggcgt ttgaacggtg atagggcaat 
     5941 agggagcgca tagctcccct tagcgactag caccatagta tcggcgaagc cgcacaccac 
     6001 gaccttcggt cgggtgcacg tcactcctta tcccggtctt aaggtagctg tttctcggat 
     6061 aaaggtgtac c 
//
