FEATURES             Location/Qualifiers
     gene            complement(284..1264)
                     /locus_tag="Alpa_01"
     CDS             complement(284..1264)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MSILAGLGAAAASFALKEGHNAIAQSRNEKNMALEHDYWKRRVNYLEELNKPSRQVAKWRSAGIAPQAVFGNSPGGAGIATDASAPNSQTPMGSSDFNFVTTIAERQRMKNEKAIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQRANNEADMQIKRGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDLIESQISATQAQTDFTKAQTMTENMTRDDRIREIKSRINNLVSSTNLNDENARSALYSRLADVLGLVMPSSAVAGAAQEVIKSRRLDNYVFNRMSDDEVRRFLDALDSKK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 15 and 16 "
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.HMPREF9141.0987"
                     /inference="similar to AA sequence:INSD:WP_022044636.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1367..1696)
                     /locus_tag="Alpa_02"
     CDS             complement(1367..1696)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MYKKKKITCPSCFSKDSSSLRDYNPFVDKVVVAHPMSYYLNGGVDLQGISTRKPLPAAFDDAESIASGDVNVFTDPTVGKLDLMDMASTMASESESRALKDGAKEPNSD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1713..3632)
                     /locus_tag="Alpa_03"
     CDS             complement(1713..3632)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MSKYRIPSDYENQTPRAVHRRVASAYGTIHPGLAVPVHHRHLNVGERIRGRIDSLLQSQPMLGPLMNGYKLITIATFTPDSAIYGWMRNGRRYEPDEYTKFGKVYFPLAGSNIGNYIDPAFQIARRVRRLTFGLDLDANRAKIYESWVSDELNGTGDNGQPTHIGRGGLWDWLGIAPGAVCPNLGAKLSSVAGIRGQLYPPSFKFNAAPFFAYFLSHYYYIANMQENYMYFTRGVGEMQKVRPDGQQESLYRPFFSDVFTSFKPNEFLLYLDTLAYRTREGAQINAMDLKVEGLPINCVQAMACAGIQGYGGLLSVPYSPDLFSNIIKQGSSPSIEITVENDQPNKPDAGFYVAVPELRLKTKLQNWMDRLFVSGGRVGDVFRTLWGAKSSAPYVNKPDFLGVWQASVNPSNVRAMANGSASGEDANLGQLAACIDRYCDFSGHSGIDYYAKEPGTFMLIAMLVPEPAYHQGLHPDLASVSFGDDFNPELNGIGFQSVPRHRFTMMPRGLDDITAHQEKNPWLGYAGTGVTIDPNTASVGEEVAWSWLRTDYPRLHGDFAQNGNYQYWVLARPFTSYFPDAGTGFYADAEGYSTYINPLDWQYVFIDQTFMAGNFAYYGYFDLKVTSSLSANYMPYLGR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_022044635.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3632..4573)
                     /locus_tag="Alpa_04"
     CDS             complement(3632..4573)
                     /product="putative replication initiation protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MIVNRRYKDMTFNEVVDYAETYYGCFWPPDYYLEVPCGYCHSCQKSYNNQYRIRLLYELRKYPPGTCLFVTLTFDDDNLKKFSKDTNKAVRLFLDRLRKDYGKQIRHWFVCEFGTLYGRPHYHGILFDVPQTLIDGYSPDVPGHHPLLASRWKYGFVFVGYVSDETCSYITKYVTKSINGDKVRPRIISSFGIGSNYFDTEESTLHKLGGQRYQPFMVLNGFQQAMPRYYYNKIFSDVDKQNIVLDRFVNPPVEFSWQGQKFSSKLERDEMRRSTLNQNITSGLTPALPLPHTERVSSFDRFKENMDKNKEFK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_022044634.1"
                     /inference="similar to AA sequence:INSD:KDS61825.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4570..4842)
                     /locus_tag="Alpa_05"
     CDS             complement(4570..4842)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MASNSWRGLEALITWSDSVTWKTKAGKMPVLVIQYDHFDDFARWKDWVSHVSFPYAYTRAIDDVVTVEVPVEPFFRFTTSPKKWHVNNLR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gttgagtcga aacccaaaga cgaaaggccg gaccgaacga tcagaacgta acgcggctag 
       61 taaaaagatg aataacgcta atttaaaatc aataatttac gtttgtaaat tacatttgta 
      121 aattacgcat aaaaaaaagg cccggagagt tttccgggcc ttacaaacta taaaacgctt 
      181 acgaacgatt caaccaacgc caaatagcgc ggatcgagta caaaactacc caagcttcaa 
      241 gagctattag aagaatccaa ataagcatac acaaatataa aaattatttc ttagaatcca 
      301 aagcgtcaag gaatctgcga acttcgtcat ctgacattct attaaataca taattgtcga 
      361 gacgacgaga ttttataact tcttgagcgg ctccagcaac agcagaagac ggcataacga 
      421 gaccaagaac atcagcaagg cgagaatata aagcagaacg cgcattttca tcattaagat 
      481 tcgtagaaga aacaagattg ttaatacgcg acttaatttc cctaatacga tcatcgcggg 
      541 tcatattttc cgtcatggtc tgagccttag tgaaatcagt ctgggcttga gtagcagaaa 
      601 tctgcgattc aatcaaatca cgctgtttct gcaaattctg cttcatttcc tccgaaacat 
      661 ccttatcagc aattaacttg tcgatcttcg ccaaggtttc agaataaaga ccacgtttaa 
      721 tttgcatatc agcttcatta ttagcacgct ggaactcttt gttaatttca tcaacagcaa 
      781 gctgaacctg ctcacgctgt ttcttaacaa gattccaatc gaattcaaga cgttgcgaat 
      841 ccttggtaac attcgggtct ttcgtatcgc cacgaagttt ctcagcttcg gcgttcagct 
      901 tattaacagt agcatcagca attgccttct catttttcat acgctgacgc tcggcaatag 
      961 tagtaacaaa attaaaatca ctggaaccca taggagtttg agaattcgga gctgaagcat 
     1021 cagtagcaat accagcaccg ccgggagaat taccaaagac agcttgagga gctataccag 
     1081 cggaacgcca tttagcaact tgacgagaag gtttattcaa ctcttcaagg taattaacac 
     1141 gccgcttcca ataatcatgc tccagagcca tatttttctc attacgagac tgggcaattg 
     1201 cattatgacc ttctttcaga gcaaaggaag cggcagcggc acctaatcca gctaaaatac 
     1261 tcataattgt tcaatttttc gttaaaagta gggtagagga cgtgctttcc gcactccgca 
     1321 atatatatca agtatattgc ggcctctacc catagaaatt gttcaattag tcggaatttg 
     1381 gttccttagc tccatccttc aaagcacgag actcagattc ggaagccata gtagacgcca 
     1441 tatccatcaa atcaagtttg ccaactgtag gatcggtaaa tacattgaca tcaccggatg 
     1501 caatagattc agcatcatca aaagcagcgg gcaaaggttt acgagtagaa ataccttgta 
     1561 aatcaacacc accgttaaga tagtaagaca taggatgcgc aacaacaacc ttgtccacaa 
     1621 aaggattata atcacgaagc gaagaagaat cttttgagaa acaagaagga caagttattt 
     1681 tctttttctt atacataaca atcgatattt aactaacgac caagatacgg catataattc 
     1741 gctgaaagtg acgaagtaac cttaagatca aaataaccgt aatacgcaaa attaccagcc 
     1801 ataaaagttt gatcaataaa aacatactgc cagtcaagag gattaatata agtcgaatag 
     1861 ccttcagcgt cagcataaaa gccagtacca gcatccggaa aataagaagt aaaaggccga 
     1921 gccaaaaccc agtactggta attaccattt tgcgcaaaat caccgtgcaa acggggataa 
     1981 tcggtacgaa gccatgacca cgccacctcc tcaccaacgg aagccgtgtt aggatctata 
     2041 gtaacaccag taccagcata acccaaccaa ggattttttt cctgatgcgc tgtaatatca 
     2101 tccagaccgc ggggcatcat agtaaaacga tgccgtggaa ccgactgaaa accaatgcca 
     2161 ttcaattccg gattaaaatc atcaccaaag gaaacggaag ccaaatccgg gtgcaaacct 
     2221 tggtgatacg cgggttcggg aacaagcata gcaataagca taaaggtacc gggttcctta 
     2281 gcataataat caataccaga atgtcccgaa aaatcgcaat acctatcaat acaagccgca 
     2341 agctgaccca aatttgcatc ctcaccggaa gccgaaccgt tagccatagc acgaacgttc 
     2401 gacggattta cagaagcctg ccaaacacca agaaaatcgg gcttattaac ataaggcgcc 
     2461 gaagatttag caccccaaag agtgcgaaaa acatcgccaa cacgaccacc ggaaacaaaa 
     2521 agacgatcca tccaattctg aagttttgtc ttcaaacgaa gctccggaac agcaacgtaa 
     2581 aaaccagcat caggtttatt gggttggtca ttttcaaccg taatttcaat agagggggaa 
     2641 gaaccttgct taataatatt actaaacaaa tcgggggaat aaggaacaga caaaaggccg 
     2701 ccataacctt gaatgccagc acaagccata gcttggacac aattaatagg aagaccttct 
     2761 accttgaggt ccatagcatt gatttgcgct ccctcacgtg tccggtaagc taaagtatct 
     2821 aagtacaaaa gaaattcgtt aggtttaaaa gacgtaaaaa catcagagaa gaaaggacga 
     2881 tacaatgatt cttgctgacc atccggacga actttctgca tttcaccaac accacgagta 
     2941 aaatacatat aattttcctg catgttagca atataataat aatgcgaaag gaaataagcg 
     3001 aagaacggag cagcattaaa tttaaaagag ggaggataaa gctgaccacg aataccggcg 
     3061 acggacgata gctttgcacc taaattagga caaactgcac cgggggcaat accaagccaa 
     3121 tcccaaagac ctccacgacc aatatgagta ggctggccgt tatcgccagt accatttaat 
     3181 tcatcagaaa cccaagattc ataaattttc gcccgattcg catccaaatc caaaccaaaa 
     3241 gtaagacgac gaacacgacg agcaatctga aatgcaggat ctatataatt acctatatta 
     3301 gaaccagcaa gcggaaaata aaccttaccg aactttgtgt attcatcagg ttcataacga 
     3361 cgaccgttgc gcatccatcc ataaatagcg gaatccgggg taaaagtagc aatagtaata 
     3421 agcttataac cattcataag agggcctaac ataggctgag actgcaaaag cgaatcaata 
     3481 cgaccgcgaa tacgttcacc aacattcaaa tgacgatgat gaaccggaac agccaaaccc 
     3541 ggatgaatgg tgccgtaagc agaagcaaca cgacgatgca cagcgcgcgg ggtctgattt 
     3601 tcataatcag acggaatacg atactttgac attatttaaa ttctttgttt ttatccatgt 
     3661 tttccttaaa tctatcaaaa gaagaaacac gttcagtatg gggtagggga agtgcaggag 
     3721 taagaccgga agtaatattt tgattcaaag tagaacgacg catttcatca cgttccagtt 
     3781 tactactaaa cttctgacct tgccagctaa actcaacagg aggattaaca aaacgatcaa 
     3841 gaacaatatt ttgcttatca acatcagaaa atattttatt ataataatac cgtggcatag 
     3901 cctgctgaaa accattcaaa accataaaag gctggtaacg ctggccacct aatttatgca 
     3961 aagtagactc ttcggtatca aaataattag aaccaatacc aaaagaagaa ataatacgcg 
     4021 ggcgcacctt atcaccattg atagacttcg taacatattt ggtaatatac gaacacgttt 
     4081 cgtcagaaac atatccaacg aaaacaaaac cgtatttcca acgagaagcc agtagaggat 
     4141 gatgaccggg cacatccggg ctatatccat ctatcaaagt ttgaggaaca tcaaaaagaa 
     4201 taccatgata atgcgggcga ccataaagag taccaaactc acaaacaaac caatgccgaa 
     4261 tttgtttacc ataatcttta cgaagacgat ccaaaaacaa tctgacagcc ttatttgtgt 
     4321 ctttcgaaaa cttctttaag ttatcgtcat caaaggttag ggtaacaaac agacaagtgc 
     4381 cgggcggata tttgcgaagc tcatacaaaa gacgtatacg atattgatta ttatacgact 
     4441 tctgacaaga atgacaataa ccgcaaggaa cctctaaata ataatccggc ggccaaaaac 
     4501 aaccgtaata agtttcagca taatcaacaa cctcattaaa tgtcatatcc ttataacgac 
     4561 gattgacaat catcttaggt tgttcacatg ccacttctta ggggaagtcg taaaccgaaa 
     4621 aaaaggttca acagggacct ctacagtaac aacatcatca atagcacgag tataagcata 
     4681 aggaaaggag acgtgcgaca cccagtcttt ccagcgggca aagtcgtcaa agtggtcata 
     4741 ctgaataacc aaaacgggca ttttacccgc tttggttttc caagtcacag aatcggacca 
     4801 agttattaac gcttcaagac ctcgccacga attcgaagcc ataagacg 
//
