FEATURES             Location/Qualifiers
     gene            complement(113..490)
                     /locus_tag="Alpa_01"
     CDS             complement(113..490)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MASAVAVVIQPIESLRFYTDEDGCVHMNSDVNLLMNAERIRNQIGEENYLNIVRSIQPSRSPYKQKLDDDALISTLKSRYLQSPAEIDAWMASLDQKYEDMVAEVKAAAAASQAPDDSQPAQSTE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(535..2478)
                     /locus_tag="Alpa_02"
     CDS             complement(535..2478)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MASNLFSFGDVRNHPHRSGFDLSRRICFTSKAGELLPVYYKLVYPGDKFQIRHQLFTRTQPVNTAAYTRIREYLDWYFVPLRLINKNLPQALMNMQDNPVQASGIVSNKIVTSDIPWTLLGHDSKPLGIANLLFRMYKGDSSAQIDPVLNFFGFNSGTLGAKLAMMLRYGNFISKDYSASTPGDLSFGLSKSDFDLRAYNSSYAVNILPFAVYQKIYADHFRFSQWEKNEPYTYNFDWYSGGNVFNVFALGAADSTLKTYLEGNNLFTLRYANWPKDLFMGVMPNSQLGDVSVVDITTDSATRSYPVSLFSSASGPNGINKLGAAIPDAPFNEATDTPSTYNFSIDFGTEKWDSSIKAKTWVGVNNVGSGVLGVTVPGSQLAASFSVLQLRMAEAVQKYREVSQVADQTVRDQIYAHFGVSLSPALSDTCFRVGGSASNIDISEVVNNNLAGENQADIMGKGVGTGQGGTSFSSDEYGVLMAIYHVVPLLDYVITGQPHELLYTNTSDLPFPEFDSIGMQSLHFGRFFNYKSDKFTFDPTASVMGYVPRFIDLKTDYDEVYGAFRSTLKSWVAPLDPEYLSKWIDSTVSAGQTYYSLNYGFFKVNPSVLDSIFKVKADSSMDTDQFLSSLYLDVKAVRNFDYDGMPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2483..2704)
                     /locus_tag="Alpa_03"
     CDS             complement(2483..2704)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MSSRRSYKAYLYQSSNMLEDNQFYLVTEIYLNARSFVEFSHKISKLNQILSDSHYAESFYSVVNLGDIYYRET"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3164..3745)
                     /locus_tag="Alpa_05"
     CDS             complement(3164..3745)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MKNYIHTLWESTDPSLSAHISISYFSLTPTNSPRILSELLIHVGNLDVSIALRPEERLSRTLRDILIVLHLFPYISKKIAAFVLLHDSLTALDFSSFHLPLKKVGKETFLSSLMESACRSMASIELFGHGARLSIPAFFDPSHIAVVLYLNMLRYYDMLGISASGQPTGNLPSSVSPSSSMTTTSRLTDKARQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2697..3011)
                     /locus_tag="Alpa_04"
     CDS             complement(2697..3011)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MGFSLFSPRVDYNRIHSAIKLSKEFFDVREKQSLQNLFSDSQSFESDWSDIFWNQTEERQREFAESGLGSACRSELSALVHSKVKHRHLNDMNNFFTERANYNV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 ttctgacctt tattataagc cttggcagca cgcttattca tgctgccatt aaaaacagaa 
       61 ccaagaagtc cggaaccacc ttcaataagc gcggcaccaa caagtggtcc cattattcag 
      121 tagattgagc aggctgagaa tcatcaggag cctgagaagc agcagcagct gccttaactt 
      181 cggcaaccat atcctcatat ttctgatcaa gagaagccat ccaagcatct atctcggccg 
      241 gagactgaag ataacgagac ttcaaagtag aaatcaacgc atcatcatcc aatttctgct 
      301 tataaggaga ccgagagggc tgaatagaac gaacaatatt caaataattc tcctcaccaa 
      361 tctgattgcg aatacgctca gcattcataa gcaaattgac atcagaattc atgtgaacac 
      421 aaccatcttc atcggtataa aaccgaagag actctatagg ctgaataaca acagcaacag 
      481 ccgaagccat tccagaaata acaaaaacac tacttttact cataacaaac acatttaata 
      541 aggcatacca tcataatcga aattccggac agccttaaca tccagataca acgaagacaa 
      601 aaattgatcg gtatccatcg aactatcagc tttaacttta aaaatactat ccaaaacaga 
      661 cggatttact ttaaagaaac cataattcaa agaataataa gtctgaccag cagaaacagt 
      721 actatcaatc catttagaca aatattccgg atccaaggga gcaacccaag acttcaaagt 
      781 agaccggaaa gcaccgtaaa cttcatcata atcagtttta agatcaataa acctaggaac 
      841 ataacccatc acagaagcag taggatcaaa agtaaactta tcggatttat agttaaaaaa 
      901 acgaccaaaa tgaagagact gcataccaat agaatcaaac tcagggaaag gaaggtcaga 
      961 cgtatttgta tacaaaagtt catgaggctg accagtaatc acataatcca aaagcggaac 
     1021 aacatgataa atagccatta aaacaccata ttcgtcagaa gaaaaagaag ttccaccttg 
     1081 accagtacca acacctttac ccataatatc agcctgattt tcaccagcaa gattattgtt 
     1141 aacaacctca gaaatatcta tattagatgc agaacctcca acacgaaaac aagtatcaga 
     1201 cagagcggga gacaaactca caccaaaatg agcgtaaatc tgatcacgga cagtctgatc 
     1261 agcaacctga gaaacctcgc gatacttctg aacagcctca gccatacgaa gctgaagaac 
     1321 ggaaaaagaa gcagctaact gagaaccagg gacagtaact cccaagactc cagaaccaac 
     1381 attattaaca ccaacccatg ttttagcctt aatagaagaa tcccacttct cagtaccaaa 
     1441 atcaatagaa aaattataag tagaaggtgt atcagtagct tcattaaaag gagcatcagg 
     1501 aatagcagca ccaagtttat ttattccatt aggacccgaa gcggatgaaa acaaagaaac 
     1561 aggatatgaa cgagtagcac tatcagtagt aatatctaca acagaaacgt cacctaactg 
     1621 agaattaggc ataactccca taaaaaggtc tttcggccaa ttggcgtaac gaagagtaaa 
     1681 aagattatta ccttcaagat acgtttttaa agtagaatca gcagcaccaa gagcaaagac 
     1741 attaaaaaca tttccaccag aataccaatc aaaattatag gtataaggct cattcttttc 
     1801 ccattgagaa aaacgaaaat gatccgcata aatcttctga taaacagcaa aaggaagaat 
     1861 atttacagca taagaagaat tgtaggcacg caaatcaaaa tcagattttg aaagaccaaa 
     1921 agaaagatca ccaggagtag aagcggaata atccttagaa ataaaattac cataacgaag 
     1981 catcatagcc agcttagctc caagagttcc agaattaaaa ccaaaaaaat ttaatacagg 
     2041 atcaatttgg gcggaagaat ctcctttata catcctaaac aaaagattag caataccaag 
     2101 aggcttagaa tcatgaccta aaagagtcca aggaatatca gacgtgacaa tcttattaga 
     2161 cacaatacct gacgcctgaa caggattgtc ctgcatattc ataagagcct gtgggaggtt 
     2221 cttattaatt aaacgcaacg gaacaaaata ccaatccaaa tattcacgaa tacgagtata 
     2281 cgcagccgta ttaacgggtt gagtacgagt aaacaactga tgacgaattt gaaatttgtc 
     2341 acccggataa accagtttat aataaactgg caaaagttca ccagccttgc tggtaaaaca 
     2401 aatacgacga gaaagatcga aaccggacct gtgagggtga ttccgaacat ctccaaaaga 
     2461 aaataaattt gaagccataa aattaagttt cgcgataata aatatcgcca aggttaacaa 
     2521 cagaataaaa agattccgca taatgagaat ccgaaaggat ctgattcagt tttgaaatct 
     2581 tatgagaaaa ttccacgaaa gaccgagcat tcaaataaat ctcagtcaca agataaaact 
     2641 gattatcttc caacatattg gaagactgat acaaatacgc cttgtaagaa cgacgactag 
     2701 acattataat tagctctctc cgtgaaaaaa ttattcatat cattcaaatg ccgatgcttc 
     2761 accttcgaat gtacaagagc agaaagttca gaacgacacg cagaacctaa tccggactct 
     2821 gcaaattctc tttgtctttc ttcggtttga ttccaaaaaa tatccgacca atcgctttca 
     2881 aaagactgag aatctgaaaa aagattttgg aggctttgtt tttctctgac atcaaaaaac 
     2941 tctttagata acttaatcgc ggaatgaatc ctattataat ctactcgcgg agagaagaga 
     3001 gagaatccca tcgaggacag aaaaatctcg caatgccgaa aaaatatata aaaacgacta 
     3061 caaaaagaac gcttaaaaaa ctcatcacca agagcacctc gagtaggatc gatatgaaga 
     3121 aactgcataa tgtcggtcat gacagaatct ttagacaact ctttcactgt ctggctttgt 
     3181 cggtcagacg agaagtagtg gtcatagatg agcttgggga tacagaagag ggaagatttc 
     3241 cagtaggctg gccgctggca gatattccga gcatatcgta atatcgcaac atattcagat 
     3301 acagtacgac ggctatgtgc gacgggtcga aaaaagcagg tatcgataat cgagctccat 
     3361 ggccgaataa ctctatactt gccattgacc ggcacgctga ttccatcaag gagcttagaa 
     3421 aagtctcctt tcctactttc ttcaacggaa gatgaaaaga actgaaatcc aaagcggtta 
     3481 gagaatcgtg caaaaggacg aatgcagcga ttttctttga aatgtaaggg aagagatgta 
     3541 aaactattaa gatatcccgc aacgtacgac tcagcctttc ctctggacga agagcaatcg 
     3601 acacgtccaa atttccaaca tgaattaaca actcggataa aattcttggc gagtttgtcg 
     3661 gagtcaaaga aaaataagat atggaaatgt gggcggaaag agacgggtcc gtactctccc 
     3721 acaatgtatg tatgtaattt ttcatgatca gaatttaaat cacgaagcaa gatctgctta 
     3781 cgtac 
//
