FEATURES             Location/Qualifiers
     gene            29..553
                     /locus_tag="Alpa_01"
     CDS             29..553
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="VSAKVNRPYMLEHLHLIEAERYKALSLRYPNFGSKFRPYILRSILRKSPLQRFKDEYFEELVWMLPELAESLKKKNNTDANGAFPQFKGLLKYINIRDYQLFSKRLRKYLSKKIGKYEKIHSYVVSEYSPKTLRPHFHILFFFRLGRNRPKHSTGCISELETWSCRYATCEGQR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_007558295.1"
                     /db_xref="eggNOG:bacteNOG07343"
                     /db_xref="eggNOG:bactNOG166725"
                     /db_xref="eggNOG:bctoNOG24068"
                     /db_xref="eggNOG:NOG117857"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            520..969
                     /locus_tag="Alpa_02"
     CDS             520..969
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="VSIRNLRGTTLIAMLRTISIVLYLFPLFIKPKNRFARALDSLISLDMRRLEKESKKLRTKGLLYLMECLIFRIKNLSDIFPAGRISIDYSPDLPTMMVLFYDGLNKYIQSCSRYYDSLPETSPLKSQLRVMYPNLFVGGANTTSVKDAG"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1032..1169
                     /locus_tag="Alpa_03"
     CDS             1032..1169
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="LDWSVPVGKISRFFYRFNRFDKMKGSLRSKLKAVALFMIIVIMNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1366..1563
                     /locus_tag="Alpa_04"
     CDS             1366..1563
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MKISANQWIEIVKLISTFVIGIITTLFVQSCTLSLSVSKNNSNSTQQTEQSSVSSIDSTSIDLKR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1567..2295
                     /locus_tag="Alpa_05"
     CDS             1567..2295
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MSLFNLSSVKNHPRRSGFDLSSKVAFTAKVGELLPVKWTLTMPGDKFSLKEQHFTRTQPVNTSAYTRVREYYDWFWCPLHLLWRNAPEVISQIQQNVQHASSFDGSVLLGSNMPCLSADQISQSLDQLKSKQNYFGFDRADLAYKLLQYLRYGNVRTGVGSNGARNYGTSIDVKDGTYNQNRAYNHALSIFPILAYKKFCQDYFRLTQWQDSAPYLWNIDYYDGKGCCYYLAYKSYVLCCLF"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 cggtttaaca agaaaaattc ccaactttgt gtcagcaaag gttaatcgtc cgtatatgct 
       61 tgagcacttg cacctcatcg aggcggaacg ttataaggcg ttatcactgc gctatcctaa 
      121 tttcggttca aaatttcgtc cgtatatttt acgttcgatt cttcgtaaat ctcccttgca 
      181 gcgttttaag gatgagtatt ttgaggagct tgtttggatg ttgcccgagc ttgcagagtc 
      241 tttgaaaaaa aagaacaata cagatgcgaa cggagctttc ccgcaattta aaggattatt 
      301 aaaatacatt aatattcgtg attatcagtt gttttctaaa cgtttaagaa aatatttatc 
      361 aaaaaaaatt ggaaaatatg aaaaaattca ttcgtacgtt gtatccgaat acagtccaaa 
      421 gacccttcgt ccgcatttcc atatcttatt tttctttcga ctcggacgaa atcgcccaaa 
      481 acattcgaca ggctgtatat cagagctgga aacttggtcg tgtcgatacg caacttgcga 
      541 gggacaacgc tgatagctat gttgcgaact atctcaatag tgttgtatct gttccctttg 
      601 tttataaagc caaaaaatcg attcgcccgc gctctagatt ctctaatctc tttggatatg 
      661 aggaggttag aaaaggaatc gaaaaagctt cggacaaaag gtctgcttta tttgatggag 
      721 tgccttatat ttcgaatcaa aaatttgtcc gatatattcc cggccggtcg catatcgata 
      781 gattattctc ccgatttacc tactatgatg gtactttttt acgacggtct gaacaaatat 
      841 attcagtcgt gcagcaggta ttacgactct ttgcccgaaa cgagcccttt aaagagccaa 
      901 ctgcgcgtaa tgtatccgaa tttgtttgtt ggtggtgcga atacaacttc cgtcaaggat 
      961 gccggataga ggattttccc gactatattc gtgattttct gcatattgtc cgtcttgacc 
     1021 gtgagagttt tttggattgg agtgttcctg ttggtaagat ttcccgtttt ttctatcgtt 
     1081 ttaataggtt tgataaaatg aaaggttctt tgcgttccaa gctaaaggcg gttgctcttt 
     1141 ttatgattat cgtgattatg aatctttaaa gaaccagctt tctttgcagg aacttgtttt 
     1201 tagcgaactt ggttattctg atgaactttt tgattctttt atattaaacc ttgtataaaa 
     1261 aactgaaaat agttatacgg ataagtggaa agatacaaat tatagagaag ttcactattt 
     1321 tcgtgttaag cataaggtgt tgaacgatga aaataatata ttcttatgaa aatttcagct 
     1381 aatcagtgga tagaaatcgt taaattgatt tctacgtttg taattggtat tattacgact 
     1441 ttgttcgtac aatcttgtac gctttctttg tctgtttcga agaataattc taattctact 
     1501 caacaaaccg aacaatcttc ggtttcaagt attgattcta ctagtattga tttaaaacgt 
     1561 taaattatga gtttatttaa tttgtcgagt gtaaagaatc atcctagacg ttcgggtttt 
     1621 gacctttcgt ctaaggttgc ctttactgct aaagttggcg aattgcttcc tgttaagtgg 
     1681 acgctgacaa tgcctggtga taagttttct ttaaaggagc agcattttac gcgtacccag 
     1741 cccgttaata cctcggctta tactcgtgtc cgtgagtatt atgactggtt ttggtgtcct 
     1801 ttacatcttc tttggcgtaa tgctccagaa gttatttctc agattcagca gaatgtgcag 
     1861 catgcttctt cgtttgatgg cagtgttttg cttggttcga atatgccttg tttgtctgct 
     1921 gaccagattt cacagtcttt ggaccaattg aaaagtaaac agaattattt tggttttgac 
     1981 cgtgctgatt tggcttataa gcttcttcag tatcttcgtt atggtaacgt acgtactggt 
     2041 gtaggttcta atggtgcccg taattatgga acttctatag acgttaagga tggtacttat 
     2101 aatcagaata gggcttataa tcatgcttta agcatttttc ctattcttgc ttataagaaa 
     2161 ttttgccagg attatttccg tttgacacag tggcaggact ctgcccctta tctttggaat 
     2221 attgattatt atgacggaaa aggttgctgt tactatcttg cctacaagtc ttacgtcctc 
     2281 tgctgcttat tttgagggtg acactttttt tgatttggag tattgcaact ggaataagga 
     2341 tatgtttttt ggtattttgc ctgatgctca attcggtgat acttcggttg ttgatatttc 
     2401 ctatggtgta actggtgcgc ctgttgttac taagcagaat ttgcagtcgc ctacgaattc 
     2461 ttctgtttct attggtaccg atgatgctaa ctcaaaaacc ttgattgcgt ctggcacgaa 
     2521 tttgactctt gatgtgcttg cacttcgtag aggtgaggca cttcaacgtt ttcgcgaaat 
     2581 ttctctttgt actcctttga actatcgttc acagattaaa gcgcattttg gtgttgatgt 
     2641 tggtgctgct atgtctggta tgtctactta tataggtggt gaggcttctt ctctggatat 
     2701 ctccgaggtt gttaatacta atattacaga aactaatgaa gctttgatag ctggtaaagg 
     2761 tgttggaact ggtcaatcta gtgaaagttt ttacgctaaa gactggggta ttttgatgtg 
     2821 tatttatcat tctgttcctc ttcttgacta tgttttgagt gctcctgacc cgcaattgtt 
     2881 tactagcgaa aatacgtctt ttcctgttcc cgaattggat tctattggat tggagcctat 
     2941 ttcagtagct tattattcta ataatccgac tgagcttccg tccgcttctg gtcttctttc 
     3001 tgatcctact gttacggtcg gatatcttcc gcgttatttt gcttggaaaa cttcgttgga 
     3061 ttatgtacta ggtgctttta ccactaccga aaaggaatgg gtggctccta ttactcaaac 
     3121 gctttggcaa aataccaaaa aacatatcct tattccag 
//
