bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-20_CDS_annotation_glimmer3.pl_2_5 Length=648 Score E Sequences producing significant alignments: (Bits) Value tva:TVAG_396470 surface antigen BspA-like 41.2 0.87 ani:AN9342.2 hypothetical protein 39.3 4.1 zma:100281066 anther-specific proline-rich protein APG 38.5 4.3 shg:Sph21_1021 FAD dependent oxidoreductase 38.5 5.6 > tva:TVAG_396470 surface antigen BspA-like Length=948 Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust. Identities = 20/56 (36%), Positives = 32/56 (57%), Gaps = 5/56 (9%) Query 1 MGKQPFISHAVNGYSRYD-MPENKAFSVTPGIIYPVR----IQFVNARDRVTLHQG 51 M + F++H++N +R D +P N +S+ GI+Y R I +N RVT+ QG Sbjct 300 MCETAFLNHSINTLTRVDSIPTNGKYSIVNGIVYDTRNNYAISSLNGISRVTIKQG 355 > ani:AN9342.2 hypothetical protein Length=1865 Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust. Identities = 35/132 (27%), Positives = 57/132 (43%), Gaps = 10/132 (8%) Query 516 IYNDIGYQDVPFWRIGYGWKAASESQSMTVAKEPCYNEFRSSYDEVLGSLQSTLTPKASV 575 ++ND Y +V F IG W+ ASE + ++ C F + + L S STL + + Sbjct 516 MFNDTVYNNVAFGLIGSQWEDASEEVKRGLVEKACKEAFVDEFVQRLPSRYSTLIGENGL 575 Query 576 PLQSYWVQQRDFYMIGLSSNPNEISPSMLFTNLSTVNNPFASDMEDNFFVNMSYKVVVKN 635 L S +QR G+ SNP P ++ ++ + D+ V + V K+ Sbjct 576 TL-SGGQRQRLTIARGIVSNP----PILILDEATS-----SIDVRGERIVQAALNRVSKD 625 Query 636 LVNKSFATRLSS 647 A RLS+ Sbjct 626 RTTIMIAHRLST 637 > zma:100281066 anther-specific proline-rich protein APG Length=377 Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/98 (28%), Positives = 44/98 (45%), Gaps = 16/98 (16%) Query 332 TGTPSKVYFAATLNVPFLAAHPMAVCPSSPDRFSRLMPPGDSNSDVDFTGVKTIPQLAVA 391 TG ++Y V FL P+ CPS L P D +++ + G+ A A Sbjct 217 TGQLQRLYALGARKVLFLGTGPVGCCPS----LRELSPAKDCSAEAN--GISVRYNAAAA 270 Query 392 TRLQEYKDLIGASGSRYSDWLYTFF---ASKIEHVDRP 426 + L+GA +RY+D Y F A+ ++++D P Sbjct 271 S-------LLGAMAARYADMHYALFDSSAALLQYIDHP 301 > shg:Sph21_1021 FAD dependent oxidoreductase Length=581 Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query 418 SKIEHVDRPKLLFSSSVMVNSQVVMNQAGQSGFAGGEAAALGQMGGSIAFNTVLGR---- 473 +K EH+ + +++F + +NS +++ + S F G G MG IAF+ GR Sbjct 302 TKREHLYKARIIFVNGATLNSNLILLNSKSSKFPNGLGNLNGLMGTHIAFHNYRGRITAS 361 Query 474 ----EQTYYF-KEPGYIFDMLTIRPVY 495 E YYF + P +F M + R VY Sbjct 362 IDGFEDQYYFGRRPTQVF-MPSFRNVY 387 Lambda K H a alpha 0.320 0.135 0.420 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1527517915246