bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-27_CDS_annotation_glimmer3.pl_2_2
Length=181
Score E
Sequences producing significant alignments: (Bits) Value
adk:Alide2_2112 hypothetical protein 37.4 1.1
adn:Alide_1913 hypothetical protein 37.4 1.1
art:Arth_4099 heavy metal translocating P-type ATPase 35.4 6.5
dia:Dtpsy_2072 hypothetical protein 35.0 6.5
ajs:Ajs_1642 hypothetical protein 35.0 6.5
lif:LINJ_34_3400 hypothetical protein 35.0 9.0
ack:C380_16430 periplasmic tricarboxylate binding receptor (TctC) 34.7 9.7
> adk:Alide2_2112 hypothetical protein
Length=319
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query 20 LNAGAGAASGIFGSIGAGRRQKRAIAAQKEENAQARAWSEKMAR------WYANNERANL 73
+N G G++G+ G Q++A+ A E+ +++AW+E + + W A +E AN
Sbjct 242 INVEIGNWRGVYGAPGITAEQRKALTAMVEKAVKSKAWAEAIQKNDWTPAWLAGDEFANF 301
Query 74 ADER 77
D+
Sbjct 302 VDQE 305
> adn:Alide_1913 hypothetical protein
Length=319
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query 20 LNAGAGAASGIFGSIGAGRRQKRAIAAQKEENAQARAWSEKMAR------WYANNERANL 73
+N G G++G+ G Q++A+ A E+ +++AW+E + + W A +E AN
Sbjct 242 INVEIGNWRGVYGAPGITAEQRKALTAMVEKAVKSKAWAEAIQKNDWTPAWLAGDEFANF 301
Query 74 ADER 77
D+
Sbjct 302 VDQE 305
> art:Arth_4099 heavy metal translocating P-type ATPase
Length=779
Score = 35.4 bits (80), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query 30 IFGSIGAGRRQKRAIAAQKEENAQARAWSEKMARWYA-NNERANLADERAYNNP--SAVM 86
I G G R + +++E A S A W A + E A + R P +A +
Sbjct 546 IAGRTGWLRDNDITVTTEQQEALGAAEESGATAIWVAVDGEPAGIVSLRDTIKPGSAAAI 605
Query 87 SRLKDAGLNPDLIYGNGAAGLVDSNVAGTAPASSVPPADV 126
SRLK GL P L+ G+ AA V V A A +PP DV
Sbjct 606 SRLKQLGLRPILLTGDNAA--VAEQV---ATAVGIPPEDV 640
> dia:Dtpsy_2072 hypothetical protein
Length=319
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 6/62 (10%)
Query 20 LNAGAGAASGIFGSIGAGRRQKRAIAAQKEENAQARAWSEKMAR------WYANNERANL 73
+N G G++G+ G Q++A+ A E+ +++AW+E + + W A ++ AN
Sbjct 242 INVEIGNWRGVYGAPGITAEQRKALVAMVEKAVKSKAWAEALEKNGWTPAWLAGDDFANF 301
Query 74 AD 75
D
Sbjct 302 VD 303
> ajs:Ajs_1642 hypothetical protein
Length=319
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 6/62 (10%)
Query 20 LNAGAGAASGIFGSIGAGRRQKRAIAAQKEENAQARAWSEKMAR------WYANNERANL 73
+N G G++G+ G Q++A+ A E+ +++AW+E + + W A ++ AN
Sbjct 242 INVEIGNWRGVYGAPGITAEQRKALVAMVEKAVKSKAWAEALEKNGWTPAWLAGDDFANF 301
Query 74 AD 75
D
Sbjct 302 VD 303
> lif:LINJ_34_3400 hypothetical protein
Length=570
Score = 35.0 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 25/141 (18%)
Query 14 TGGASLLNAGAGAASGIFGSIGAGRRQKRAIAAQKEENAQARAWSEKMARWYANNERANL 73
TG +++++ + G +G R R +A + E SE M+R Y +
Sbjct 140 TGTKTVIHSYNSLVCFLLGRVGEAARADRRMAVRTRE-----VLSE-MSRVYGSTALLLQ 193
Query 74 ADERAYNNPSAVMSRLKDAGLNPDLIYGNGAAGLVDSNVAGTAPASSVPPADVAGPIMAT 133
A + V L DAGL P ++YG+G+ LV + ++
Sbjct 194 GGVLASSAHFGVAKALYDAGLLPPVVYGSGSGALVAT-------------------LVCC 234
Query 134 PTAMESLFQGAAYAKTLAETN 154
T + SLF ++ + ++AE N
Sbjct 235 STDLASLFHSSSGSNSIAEAN 255
> ack:C380_16430 periplasmic tricarboxylate binding receptor (TctC)
Length=319
Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/63 (29%), Positives = 34/63 (54%), Gaps = 6/63 (10%)
Query 20 LNAGAGAASGIFGSIGAGRRQKRAIAAQKEENAQARAWSEKMAR------WYANNERANL 73
+N G G++G+ G + Q+ A+ A E+ +++AWSE +A+ W A + A+
Sbjct 242 INVEIGNWRGVYGAPGIDKAQRDALIASIEKATKSKAWSEALAKNDWTPAWMAGDAFASF 301
Query 74 ADE 76
D+
Sbjct 302 VDQ 304
Lambda K H a alpha
0.310 0.124 0.344 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 166806302463