bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-27_CDS_annotation_glimmer3.pl_2_3
Length=83
Score E
Sequences producing significant alignments: (Bits) Value
msd:MYSTI_07603 hypothetical protein 34.7 0.86
erc:Ecym_4292 hypothetical protein 35.0 1.2
vfu:vfu_A02330 PTS permease for mannose subunit IIIMan C 33.9 1.8
thb:N186_08425 corrinoid methyltransferase 33.9 1.8
hru:Halru_0963 histidine ammonia-lyase 33.9 2.5
mar:MAE_03730 hypothetical protein 32.7 2.9
nat:NJ7G_4111 histidine ammonia-lyase 33.5 3.2
hmg:100211279 uncharacterized LOC100211279 33.5 3.6
msd:MYSTI_02842 FlhB/HrpN/YscU/SpaS family protein 32.0 3.6
tpr:Tpau_2441 XRE family transcriptional regulator 32.0 5.3
bbrs:BS27_0126 Transcriptional regulator, LacI family 32.3 7.3
bbrn:B2258_0099 Transcriptional regulator, LacI family 32.3 7.3
bbrj:B7017_0129 Transcriptional regulator, LacI family 32.3 7.3
bbrc:B7019_0108 Transcriptional regulator, LacI family 32.3 7.6
bbv:HMPREF9228_0112 bacterial regulatory protein, LacI family 32.3 7.8
bbrv:B689b_0100 Transcriptional regulator, LacI family 32.3 7.8
bbre:B12L_0103 Transcriptional regulator, LacI family 32.3 7.8
bbru:Bbr_0112 Transcriptional regulator, LacI family 32.3 7.8
kps:KPNJ2_02885 Transcriptional regulator, GntR family protein 32.3 7.8
kpa:KPNJ1_02885 Transcriptional regulator, GntR family protein 32.3 7.8
kpi:D364_08070 GntR family transcriptional regulator 32.3 7.8
kpj:N559_2734 GntR family transcriptional regulator 32.3 7.8
kpo:KPN2242_10750 putative GntR-family transcriptional repressor 32.3 7.8
kpq:KPR0928_12480 GntR family transcriptional regulator 32.3 7.8
kpz:KPNIH27_12175 GntR family transcriptional regulator 32.3 7.8
kph:KPNIH24_15755 GntR family transcriptional regulator 32.3 7.8
kpp:A79E_2647 GntR family transcriptional regulator 32.3 7.8
kpm:KPHS_25010 GntR family transcriptional regulator 32.3 7.8
kpu:KP1_2612 ydfH; GntR family transcriptional regulator 32.3 7.8
kpn:KPN_01589 ydfH; GntR family transcriptional regulator 32.3 7.8
htu:Htur_4040 histidine ammonia-lyase (EC:4.3.1.3) 32.3 8.0
rhd:R2APBS1_3886 putative Zn peptidase 32.3 8.2
> msd:MYSTI_07603 hypothetical protein
Length=185
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/69 (35%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query 5 SDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETS 64
+DEP V VT ++++RL Q + VS NA+S + LDV + DA TLWE S
Sbjct 58 TDEPGVDA-EVTFTEVQRLLEQAVSVSRRNASSLVELGYFLDVVRGREDDA--ATLWEES 114
Query 65 QASKARIMK 73
+ ++
Sbjct 115 AGKSLKTLE 123
> erc:Ecym_4292 hypothetical protein
Length=850
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/53 (36%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query 13 LSVTPSDIERLARQGIPV---SVPNANSFY----NIDSGLDVPPELKVDADRN 58
L +T SD+ +LA GIPV N + ++ NI+SG+++ PE K+ + N
Sbjct 453 LCITKSDLTKLANHGIPVDSFQEDNKDWYFQCVCNIESGVNIDPESKIFSGYN 505
> vfu:vfu_A02330 PTS permease for mannose subunit IIIMan C
Length=157
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/56 (27%), Positives = 27/56 (48%), Gaps = 0/56 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDAD 56
+ +SD + + TP D RL G+P++ N + + ID + + VDA+
Sbjct 70 IHKASDRQRILLVCKTPHDFRRLVEGGVPIAAINVGNMHYIDGKTQISKTVSVDAE 125
> thb:N186_08425 corrinoid methyltransferase
Length=219
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (52%), Gaps = 3/52 (6%)
Query 1 VRSSSDEPV--VSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDVPPE 50
++ SSD PV V+ DI L + + +V A F ID G+DVPPE
Sbjct 81 IKGSSDVPVTGVAVFGTVRGDIHELGKN-LAAAVFEAEGFQVIDLGVDVPPE 131
> hru:Halru_0963 histidine ammonia-lyase
Length=556
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query 2 RSSSDEPV-VSGLSVTPSDIERLARQGIPVSV 32
R + D+PV V G ++TP+D+ER+AR G PV +
Sbjct 10 RPTGDDPVRVDGETLTPADVERVARLGAPVEL 41
> mar:MAE_03730 hypothetical protein
Length=115
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/46 (33%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query 16 TPSDIERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLW 61
TP I + QGI N+++ +D G+ +P EL++ DR W
Sbjct 48 TPGGISTFSVQGI------GNNWWKLDRGISIPSELELINDRGNHW 87
> nat:NJ7G_4111 histidine ammonia-lyase
Length=524
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 0/25 (0%)
Query 9 VVSGLSVTPSDIERLARQGIPVSVP 33
VV G S+TP+ +ER+AR+G VSVP
Sbjct 7 VVDGSSLTPAGVERVAREGATVSVP 31
> hmg:100211279 uncharacterized LOC100211279
Length=862
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query 19 DIERLARQGIPV--------SVPNANSFYNIDSGLDVPPELKVDAD 56
+I+RL +Q IP VPN NS + S +D+PP LK + D
Sbjct 293 EIDRLKKQPIPCPEVRIVEKEVPNNNSVLSFKSRMDLPPNLKDEFD 338
> msd:MYSTI_02842 FlhB/HrpN/YscU/SpaS family protein
Length=93
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/53 (34%), Positives = 30/53 (57%), Gaps = 3/53 (6%)
Query 2 RSSSDEPVVSGLSVTPSDIERLARQ-GIPV--SVPNANSFYNIDSGLDVPPEL 51
+ S+ V GL + I +A++ IP+ +VP AN+ Y ++ G +VP EL
Sbjct 17 KDSAPRVVAKGLRLKAEKIRAIAKEHNIPIMRNVPLANALYRVEVGQEVPEEL 69
> tpr:Tpau_2441 XRE family transcriptional regulator
Length=113
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/41 (44%), Positives = 25/41 (61%), Gaps = 1/41 (2%)
Query 18 SDIERLARQGIPVSVPNANSFYNIDSGLDVPPELKV-DADR 57
S+IER G S P+ ++ Y + + LDVPP L + DADR
Sbjct 45 SNIERNVSSGDRFSDPHMSTLYRLAAALDVPPALLLPDADR 85
> bbrs:BS27_0126 Transcriptional regulator, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> bbrn:B2258_0099 Transcriptional regulator, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> bbrj:B7017_0129 Transcriptional regulator, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> bbrc:B7019_0108 Transcriptional regulator, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> bbv:HMPREF9228_0112 bacterial regulatory protein, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> bbrv:B689b_0100 Transcriptional regulator, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> bbre:B12L_0103 Transcriptional regulator, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> bbru:Bbr_0112 Transcriptional regulator, LacI family
Length=343
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/47 (32%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 1 VRSSSDEPVVSGLSVTPSDIERLARQGIPVSVPNANSFYNIDSGLDV 47
VR ++D +VS ++ P+++ERL +P+ N S DSG+ +
Sbjct 115 VRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSI 161
> kps:KPNJ2_02885 Transcriptional regulator, GntR family protein
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpa:KPNJ1_02885 Transcriptional regulator, GntR family protein
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpi:D364_08070 GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpj:N559_2734 GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpo:KPN2242_10750 putative GntR-family transcriptional repressor
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpq:KPR0928_12480 GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpz:KPNIH27_12175 GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kph:KPNIH24_15755 GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpp:A79E_2647 GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpm:KPHS_25010 GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpu:KP1_2612 ydfH; GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> kpn:KPN_01589 ydfH; GntR family transcriptional regulator
Length=228
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 30/63 (48%), Gaps = 2/63 (3%)
Query 21 ERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKARKRERD 80
+ L +Q I V N F+ +D + +L + AD WET + KA I + R D
Sbjct 115 QNLHQQRIAVDRQQLNDFFLLDD--EFHQKLSIIADCQLAWETVENIKAAIDRVRYMSLD 172
Query 81 HLT 83
H+T
Sbjct 173 HVT 175
> htu:Htur_4040 histidine ammonia-lyase (EC:4.3.1.3)
Length=524
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query 5 SDEPVV-SGLSVTPSDIERLARQGIPVSVP 33
+DEPVV G S+TP +ER+AR G V +P
Sbjct 2 TDEPVVVDGESLTPDAVERVARHGATVRIP 31
> rhd:R2APBS1_3886 putative Zn peptidase
Length=371
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/62 (34%), Positives = 33/62 (53%), Gaps = 3/62 (5%)
Query 16 TPSDIERLARQGIPVSVPNANSFYNIDSGLDVPPELKVDADRNTLWETSQASKARIMKAR 75
T SDIE RQ PV + A F+ +D+G P ++ + N W QA+KA +++
Sbjct 35 TLSDIELGKRQVAPVDLVRAAEFFGVDTGYFTDP-FELAGEANFSWR--QAAKADDLESF 91
Query 76 KR 77
+R
Sbjct 92 ER 93
Lambda K H a alpha
0.311 0.127 0.353 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 126236627437