bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-28_CDS_annotation_glimmer3.pl_2_1
Length=101
Score E
Sequences producing significant alignments: (Bits) Value
msd:MYSTI_02842 FlhB/HrpN/YscU/SpaS family protein 33.5 1.3
vfu:vfu_A02330 PTS permease for mannose subunit IIIMan C 34.7 1.5
mar:MAE_03730 hypothetical protein 33.5 2.1
htu:Htur_4040 histidine ammonia-lyase (EC:4.3.1.3) 34.7 2.2
hru:Halru_0963 histidine ammonia-lyase 34.7 2.3
nat:NJ7G_4111 histidine ammonia-lyase 34.3 3.0
mcb:Mycch_3390 acetyltransferase 33.1 5.0
mcf:102145110 UBXN11; UBX domain protein 11 33.5
mcc:719826 UBXN11; UBX domain protein 11 33.1
aza:AZKH_3309 hypothetical protein 32.0 6.1
plf:PANA5342_3997 hypothetical protein 33.1 6.7
gox:GOX2051 hypothetical protein 32.7 7.7
nle:100582180 UBXN11; UBX domain protein 11 32.7
bfo:BRAFLDRAFT_76519 hypothetical protein 32.7 8.9
dbr:Deba_0440 nitrogenase molybdenum-iron protein subunit alph... 32.7 9.2
> msd:MYSTI_02842 FlhB/HrpN/YscU/SpaS family protein
Length=93
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (32%), Positives = 36/66 (55%), Gaps = 5/66 (8%)
Query 27 VVSGLSITPSDIERLARQ-GVPV--SVPNANSFYSIDSGLEVPPEL--KVDADRNSLWEM 81
V GL + I +A++ +P+ +VP AN+ Y ++ G EVP EL V N ++E+
Sbjct 24 VAKGLRLKAEKIRAIAKEHNIPIMRNVPLANALYRVEVGQEVPEELYDAVAEVLNFIYEL 83
Query 82 SQQSKA 87
++ A
Sbjct 84 QREHAA 89
> vfu:vfu_A02330 PTS permease for mannose subunit IIIMan C
Length=157
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (54%), Gaps = 0/41 (0%)
Query 34 TPSDIERLARQGVPVSVPNANSFYSIDSGLEVPPELKVDAD 74
TP D RL GVP++ N + + ID ++ + VDA+
Sbjct 85 TPHDFRRLVEGGVPIAAINVGNMHYIDGKTQISKTVSVDAE 125
> mar:MAE_03730 hypothetical protein
Length=115
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (52%), Gaps = 8/60 (13%)
Query 20 RVSTDEPVVSGLSITPSDIERLARQGVPVSVPNANSFYSIDSGLEVPPELKVDADRNSLW 79
++ E +V G TP I + QG+ N+++ +D G+ +P EL++ DR + W
Sbjct 36 QIWVKETLVDGQ--TPGGISTFSVQGI------GNNWWKLDRGISIPSELELINDRGNHW 87
> htu:Htur_4040 histidine ammonia-lyase (EC:4.3.1.3)
Length=524
Score = 34.7 bits (78), Expect = 2.2, Method: Composition-based stats.
Identities = 17/30 (57%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query 23 TDEPVV-SGLSITPSDIERLARQGVPVSVP 51
TDEPVV G S+TP +ER+AR G V +P
Sbjct 2 TDEPVVVDGESLTPDAVERVARHGATVRIP 31
> hru:Halru_0963 histidine ammonia-lyase
Length=556
Score = 34.7 bits (78), Expect = 2.3, Method: Composition-based stats.
Identities = 16/35 (46%), Positives = 26/35 (74%), Gaps = 1/35 (3%)
Query 19 KRVSTDEPV-VSGLSITPSDIERLARQGVPVSVPN 52
+R + D+PV V G ++TP+D+ER+AR G PV + +
Sbjct 9 RRPTGDDPVRVDGETLTPADVERVARLGAPVELTD 43
> nat:NJ7G_4111 histidine ammonia-lyase
Length=524
Score = 34.3 bits (77), Expect = 3.0, Method: Composition-based stats.
Identities = 15/27 (56%), Positives = 21/27 (78%), Gaps = 0/27 (0%)
Query 27 VVSGLSITPSDIERLARQGVPVSVPNA 53
VV G S+TP+ +ER+AR+G VSVP +
Sbjct 7 VVDGSSLTPAGVERVAREGATVSVPES 33
> mcb:Mycch_3390 acetyltransferase
Length=201
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/86 (27%), Positives = 42/86 (49%), Gaps = 8/86 (9%)
Query 2 KVLSRINPSEPFYRVSVKRVSTDEPVVS---GLSITPSDIERLARQGVPV---SVPNANS 55
+++ R +P EP + ++V + +D V G ++ S ++R +G P S +N
Sbjct 113 ELMKRHHPEEPHWYLAV--IGSDPGVRGTGFGQALMASRLDRCDAEGAPAYLESTKESNV 170
Query 56 FYSIDSGLEVPPELKVDADRNSLWEM 81
Y + G EV EL V ++W+M
Sbjct 171 PYYLRFGFEVTGELTVPDGGPTMWQM 196
> mcf:102145110 UBXN11; UBX domain protein 11
Length=498
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 44/90 (49%), Gaps = 7/90 (8%)
Query 8 NPSEPFYRVSVKRVSTDEPVVSGLSITPSDIERLARQGVPVSVPNANSFYSIDSGLE-VP 66
P +PFY S +R D ++ G PS+++RL GVP V + + ++ GL+ P
Sbjct 251 GPFQPFYDPSTQRCLRD--ILDGF--FPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFP 306
Query 67 PELKVDADR--NSLWEMSQQSKARIMKARK 94
E +V + + W+ +++ M A K
Sbjct 307 GEGRVVGRQRMHKAWDRAEEHPGSRMTAEK 336
> mcc:719826 UBXN11; UBX domain protein 11
Length=499
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/90 (28%), Positives = 44/90 (49%), Gaps = 7/90 (8%)
Query 8 NPSEPFYRVSVKRVSTDEPVVSGLSITPSDIERLARQGVPVSVPNANSFYSIDSGLE-VP 66
P +PFY S +R D ++ G PS+++RL GVP V + + ++ GL+ P
Sbjct 252 GPFQPFYDPSTQRCLRD--ILDGF--FPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFP 307
Query 67 PELKVDADR--NSLWEMSQQSKARIMKARK 94
E +V + + W+ +++ M A K
Sbjct 308 GEGRVVGRQRMHKAWDRAEEHPGSRMTAEK 337
> aza:AZKH_3309 hypothetical protein
Length=90
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/39 (31%), Positives = 26/39 (67%), Gaps = 3/39 (8%)
Query 7 INPSEPFYRVSVKRVSTDEPVVSGL---SITPSDIERLA 42
++P+EP + + K++ TDEP+ +G+ +T D+++ A
Sbjct 27 LSPAEPVHELRKKKMKTDEPMETGMMKKGMTKGDVKKAA 65
> plf:PANA5342_3997 hypothetical protein
Length=279
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 25/44 (57%), Gaps = 2/44 (5%)
Query 4 LSRINPSEPFYRVSVKRVSTDEPVVSGLS--ITPSDIERLARQG 45
LS +P E VS V+TDEPVVS S P DI RL RQG
Sbjct 3 LSHASPDELVAPVSGASVTTDEPVVSSPSPEKRPPDIRRLLRQG 46
> gox:GOX2051 hypothetical protein
Length=380
Score = 32.7 bits (73), Expect = 7.7, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 0/43 (0%)
Query 29 SGLSITPSDIERLARQGVPVSVPNANSFYSIDSGLEVPPELKV 71
+G ++TP+ + + +G P S+P A ++ SG+ +P E+ V
Sbjct 263 NGATVTPAQVSAILHKGAPASLPRATYRMALFSGMILPVEIAV 305
> nle:100582180 UBXN11; UBX domain protein 11
Length=495
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (53%), Gaps = 4/57 (7%)
Query 8 NPSEPFYRVSVKRVSTDEPVVSGLSITPSDIERLARQGVPVSVPNANSFYSIDSGLE 64
P +PFY S +R D ++ G PS+++RL GVP V + S ++ GL+
Sbjct 252 GPFQPFYDPSTQRCLRD--ILDGF--FPSELQRLYPNGVPFKVSDLRSQVYLEDGLD 304
> bfo:BRAFLDRAFT_76519 hypothetical protein
Length=238
Score = 32.7 bits (73), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (65%), Gaps = 3/37 (8%)
Query 21 VSTDEPVVSGLSITPSDIERLARQG---VPVSVPNAN 54
VS D+ + G + TP ++E LAR+G +PVS P A+
Sbjct 132 VSVDQASLPGFTCTPKELEHLARKGRTFLPVSCPCAS 168
> dbr:Deba_0440 nitrogenase molybdenum-iron protein subunit alpha
(EC:1.18.6.1)
Length=547
Score = 32.7 bits (73), Expect = 9.2, Method: Composition-based stats.
Identities = 14/37 (38%), Positives = 23/37 (62%), Gaps = 0/37 (0%)
Query 62 GLEVPPELKVDADRNSLWEMSQQSKARIMKARKREKD 98
G +V PELKVDAD ++ E+ R+ + RK +++
Sbjct 392 GRQVIPELKVDADSRNIEELEVSPDERLFRPRKSQEE 428
Lambda K H a alpha
0.312 0.128 0.355 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 127879331103