bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters



Query= Contig-37_CDS_annotation_glimmer3.pl_2_1

Length=251
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  cyc:PCC7424_4111  sugar fermentation stimulation protein            35.4    7.7


> cyc:PCC7424_4111  sugar fermentation stimulation protein
Length=243

 Score = 35.4 bits (80),  Expect = 7.7, Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (49%), Gaps = 10/92 (11%)

Query  76   GQNTGMKGGTVKIKIDEP--SYIIG-IVSITPRIDYSQGNRFDVDLDTLDDLHKPALDAI  132
            G NT +    +K+ + +   S ++G    I P + Y + N+  +D    D+    AL +I
Sbjct  86   GINTALPNQVIKLALTQHLFSQLVGHYTQIRPEVPYGKENKSRIDFLLTDE---EALSSI  142

Query  133  GFQ----DLTTNKMAWWDETITADGEKQLKSV  160
              +     L  NKMA + +T+T  G+K L+ +
Sbjct  143  YLEVKNTTLAENKMAMFPDTVTTRGQKHLREM  174



Lambda      K        H        a         alpha
   0.316    0.134    0.392    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 366305937645