bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-5_CDS_annotation_glimmer3.pl_2_5
Length=84
Score E
Sequences producing significant alignments: (Bits) Value
eus:EUTSA_v10010983mg hypothetical protein 33.9 1.9
lgi:LOTGIDRAFT_168254 hypothetical protein 33.9 2.3
cme:CYME_CMO261C hypothetical protein 33.1 5.0
vvu:VV1_2648 Paraquat-inducible protein B 32.7 6.7
vvy:VV1642 paraquat-inducible protein B 32.7 6.7
vvl:VV93_v1c15170 paraquat-inducible protein B 32.7 6.8
kci:CKCE_0537 xerC; integrase/recombinase XerC 32.3 7.0
tgu:100218054 STARD9; StAR-related lipid transfer (START) doma... 32.3 8.4
kct:CDEE_0128 integrase/recombinase XerC 32.3 8.6
lmr:LMR479A_2720 conserved exported protein of unknown function 32.0 9.2
lmy:LM5923_2737 hypothetical protein 32.0 9.2
lmn:LM5578_2788 hypothetical protein 32.0 9.2
> eus:EUTSA_v10010983mg hypothetical protein
Length=239
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (52%), Gaps = 8/64 (13%)
Query 15 VQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMFELERDSQGKIIRA 74
++E TN G V+LP +F DG ++ ++ +V P+ R FEL + QG +R
Sbjct 182 LEEFTNGGRVVTLPCGHEFDDGCIVKWFETSHVCPLCR--------FELPCEDQGTSVRY 233
Query 75 HKVD 78
+D
Sbjct 234 EFID 237
> lgi:LOTGIDRAFT_168254 hypothetical protein
Length=416
Score = 33.9 bits (76), Expect = 2.3, Method: Composition-based stats.
Identities = 24/78 (31%), Positives = 41/78 (53%), Gaps = 12/78 (15%)
Query 8 LAITPSQVQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMFELERD- 66
+T ++E + + I + + +FL N+LE VD IFRR A T+ +++RD
Sbjct 227 FGVTLEYIKENSGRIIPIVVEQTVEFLKENALE------VDGIFRRSARAVTLKQVQRDF 280
Query 67 SQGKIIRAHKVDRKKFGD 84
++GK +VD + GD
Sbjct 281 NEGK-----EVDFNEIGD 293
> cme:CYME_CMO261C hypothetical protein
Length=343
Score = 33.1 bits (74), Expect = 5.0, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 0/48 (0%)
Query 36 GNSLETAKSWNVDPIFRRDANICTMFELERDSQGKIIRAHKVDRKKFG 83
G LETA +W +D +F AN+ T L D+ G+I+ + + G
Sbjct 198 GGELETALAWLIDTVFGACANVTTAVWLTGDNTGRIVAQRGMVKAALG 245
> vvu:VV1_2648 Paraquat-inducible protein B
Length=885
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 17/44 (39%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query 10 ITPSQVQELTNKGISVSLPNAKQFLDGN-SLETAKSWNVDPIFR 52
+T S ELT G+SV++P AKQ L G+ S + N +P ++
Sbjct 466 VTGSATAELTESGLSVTVPPAKQLLTGSISFVSEGKNNANPTYQ 509
> vvy:VV1642 paraquat-inducible protein B
Length=893
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 17/44 (39%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query 10 ITPSQVQELTNKGISVSLPNAKQFLDGN-SLETAKSWNVDPIFR 52
+T S ELT G+SV++P AKQ L G+ S + N +P ++
Sbjct 474 VTGSATAELTESGLSVTVPPAKQLLTGSISFVSEGKNNANPTYQ 517
> vvl:VV93_v1c15170 paraquat-inducible protein B
Length=885
Score = 32.7 bits (73), Expect = 6.8, Method: Composition-based stats.
Identities = 17/44 (39%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query 10 ITPSQVQELTNKGISVSLPNAKQFLDGN-SLETAKSWNVDPIFR 52
+T S ELT G+SV++P AKQ L G+ S + N +P ++
Sbjct 466 VTGSATAELTESGLSVTVPPAKQLLTGSISFVSEGKNNANPTYQ 509
> kci:CKCE_0537 xerC; integrase/recombinase XerC
Length=282
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (51%), Gaps = 4/51 (8%)
Query 11 TPSQVQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMF 61
TP +EL S+S+ K LDGN L+ K N DPI RD I +F
Sbjct 64 TPKPTKELPK---SISVDQMKSLLDGN-LDKIKIKNADPIIIRDQAILELF 110
> tgu:100218054 STARD9; StAR-related lipid transfer (START) domain
containing 9
Length=4235
Score = 32.3 bits (72), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 0/76 (0%)
Query 8 LAITPSQVQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMFELERDS 67
L+ +PS + G P + + L T + DP F + + E DS
Sbjct 3360 LSASPSSQTAFSKSGCPTKEPLGYSSVASSPLHTKRKLRADPQFSMQHYVDNFSQTETDS 3419
Query 68 QGKIIRAHKVDRKKFG 83
+ R HK RKK G
Sbjct 3420 ESSTSREHKSIRKKSG 3435
> kct:CDEE_0128 integrase/recombinase XerC
Length=308
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (51%), Gaps = 4/51 (8%)
Query 11 TPSQVQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMF 61
TP +EL S+S+ K LDGN L+ K N DPI RD I +F
Sbjct 90 TPKPTKELPK---SISVDQMKSLLDGN-LDKIKIKNADPIIIRDQAILELF 136
> lmr:LMR479A_2720 conserved exported protein of unknown function
Length=178
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (46%), Gaps = 10/59 (17%)
Query 1 MLVTKPDLAITPSQVQELTNKGISVSLPNAKQF---LDGNSLET-------AKSWNVDP 49
M + + PS V T G S+S P AK F ++G+++ AKSWN P
Sbjct 11 MFTVLFTILLIPSNVNAYTKLGYSLSKPTAKNFKFYINGSAISYKNIIINGAKSWNASP 69
> lmy:LM5923_2737 hypothetical protein
Length=178
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (46%), Gaps = 10/59 (17%)
Query 1 MLVTKPDLAITPSQVQELTNKGISVSLPNAKQF---LDGNSLET-------AKSWNVDP 49
M + + PS V T G S+S P AK F ++G+++ AKSWN P
Sbjct 11 MFTVLFTILLIPSNVNAYTKLGYSLSKPTAKNFKFYINGSAISYKNIIINGAKSWNASP 69
> lmn:LM5578_2788 hypothetical protein
Length=178
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (46%), Gaps = 10/59 (17%)
Query 1 MLVTKPDLAITPSQVQELTNKGISVSLPNAKQF---LDGNSLET-------AKSWNVDP 49
M + + PS V T G S+S P AK F ++G+++ AKSWN P
Sbjct 11 MFTVLFTILLIPSNVNAYTKLGYSLSKPTAKNFKFYINGSAISYKNIIINGAKSWNASP 69
Lambda K H a alpha
0.317 0.133 0.383 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 125823653952