bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-11_CDS_annotation_glimmer3.pl_2_7
Length=44
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_039_Microviridae_AG096_putative.VP1 57.8 2e-13
Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1 28.5 0.002
Pichovirinae_Pavin_723_Microviridae_AG0327_putative.VP1 25.0 0.027
Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1 22.7 0.13
Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1 22.3 0.18
Alpavirinae_Human_feces_A_021_Microviridae_AG077_putative.VP1 21.9 0.28
Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1 21.9 0.31
Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1 21.6 0.32
Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4 20.4 0.94
Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1 19.6 1.8
> Alpavirinae_Human_feces_B_039_Microviridae_AG096_putative.VP1
Length=579
Score = 57.8 bits (138), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/30 (90%), Positives = 29/30 (97%), Gaps = 0/30 (0%)
Query 15 LDADSSQASIAGKGISSNSGHTLTYDCGAE 44
LD DSSQASIAGKG+SSNSGHT+TYDCGAE
Sbjct 389 LDTDSSQASIAGKGVSSNSGHTITYDCGAE 418
> Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1
Length=518
Score = 28.5 bits (62), Expect = 0.002, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
Query 16 DADSSQASIAGKGISSNSGHTLTYDC 41
DA+ + ++AG GI+++ G+T+ Y C
Sbjct 345 DANVAVGTMAGHGITAHGGNTIKYRC 370
> Pichovirinae_Pavin_723_Microviridae_AG0327_putative.VP1
Length=508
Score = 25.0 bits (53), Expect = 0.027, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (58%), Gaps = 0/26 (0%)
Query 16 DADSSQASIAGKGISSNSGHTLTYDC 41
D Q ++AG GIS SG + +Y C
Sbjct 334 DGGLPQGNMAGHGISVTSGKSGSYYC 359
> Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1
Length=522
Score = 22.7 bits (47), Expect = 0.13, Method: Composition-based stats.
Identities = 8/23 (35%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
Query 19 SSQASIAGKGISSNSGHTLTYDC 41
+ Q ++AG G+S S + ++Y C
Sbjct 350 TPQGNMAGHGVSVGSSNYVSYKC 372
> Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1
Length=584
Score = 22.3 bits (46), Expect = 0.18, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 18 DSSQASIAGKGISSNSGHTLTY 39
+S++A IAGKGI + G+ Y
Sbjct 388 ESNEALIAGKGIGTGQGNEEFY 409
> Alpavirinae_Human_feces_A_021_Microviridae_AG077_putative.VP1
Length=622
Score = 21.9 bits (45), Expect = 0.28, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 0/20 (0%)
Query 16 DADSSQASIAGKGISSNSGH 35
DA A IAGKG++S G+
Sbjct 420 DAAQYPALIAGKGVNSGDGN 439
> Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1
Length=614
Score = 21.9 bits (45), Expect = 0.31, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query 15 LDADSSQASIAGKGISSNSGHTLTY 39
L A+ A IAGKG+ + +G + TY
Sbjct 417 LAAEEDTAVIAGKGVGTGNG-SFTY 440
> Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1
Length=607
Score = 21.6 bits (44), Expect = 0.32, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query 15 LDADSSQASIAGKGISSNSGHTLTY 39
L A+ A IAGKG+ + +G + TY
Sbjct 408 LAAEGDTAVIAGKGVGAGNG-SFTY 431
> Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4
Length=611
Score = 20.4 bits (41), Expect = 0.94, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 12/15 (80%), Gaps = 0/15 (0%)
Query 25 AGKGISSNSGHTLTY 39
+G G++++S H+ TY
Sbjct 544 SGSGLATDSPHSWTY 558
> Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1
Length=505
Score = 19.6 bits (39), Expect = 1.8, Method: Composition-based stats.
Identities = 6/21 (29%), Positives = 13/21 (62%), Gaps = 0/21 (0%)
Query 21 QASIAGKGISSNSGHTLTYDC 41
Q +++G G++ +G+ Y C
Sbjct 336 QGNMSGHGVAVGTGNVGKYYC 356
Lambda K H a alpha
0.305 0.121 0.334 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3716982