bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-12_CDS_annotation_glimmer3.pl_2_3
Length=369
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_22_017_Microviridae_AG0396_hypothetical.p... 70.9 2e-15
Alpavirinae_Human_feces_A_034_Microviridae_AG0101_hypothetical.... 65.1 2e-13
Alpavirinae_Human_feces_E_011_Microviridae_AG0387_hypothetical.... 64.7 2e-13
Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2 60.5 6e-12
Alpavirinae_Human_gut_33_005_Microviridae_AG0182_hypothetical.p... 57.8 3e-11
Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.p... 54.3 5e-10
Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.pr... 47.0 1e-07
Gokush_Pavin_110_Microviridae_AG052_putative.VP2 45.8 2e-07
Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.... 43.9 1e-06
Alpavirinae_Human_feces_D_015_Microviridae_AG018_hypothetical.p... 42.4 4e-06
> Alpavirinae_Human_gut_22_017_Microviridae_AG0396_hypothetical.protein.BACPLE
Length=386
Score = 70.9 bits (172), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 52/86 (60%), Gaps = 13/86 (15%)
Query 18 IGSIVGGLFGKKGSDNAAKAQ-LQIARETNANNYRIAQENNAFNERMV-----------D 65
+GSI GGL G GS A +Q Q RETN NY+I Q NN FNERM +
Sbjct 4 LGSIAGGLLGL-GSSAAQNSQNRQNVRETNQMNYKINQMNNQFNERMAIQQRNWQENMWN 62
Query 66 KMNDWNSAKNQRARLEEAGLNPYLML 91
K N +N+A QR RLEEAGLNPYLM+
Sbjct 63 KENAYNTASAQRQRLEEAGLNPYLMM 88
> Alpavirinae_Human_feces_A_034_Microviridae_AG0101_hypothetical.protein.BACPLE
Length=365
Score = 65.1 bits (157), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 53/87 (61%), Gaps = 6/87 (7%)
Query 10 LLSPGISAIGSIVGGLFG-----KKGSDNAAKAQLQIARETNANNYRIAQENNAFNERMV 64
++ I A GS+ G+ ++GS N K QLQ+ + N +Q++ F + M
Sbjct 1 MIGAAIGAAGSLASGVVNAIGNNRQGSKNR-KHQLQMQKIQNEWASSESQKSRDFAKSMF 59
Query 65 DKMNDWNSAKNQRARLEEAGLNPYLML 91
D N+WNSAK+QRARLEEAGLNPYLM+
Sbjct 60 DASNEWNSAKSQRARLEEAGLNPYLMM 86
> Alpavirinae_Human_feces_E_011_Microviridae_AG0387_hypothetical.protein.BACEGG.02723
Length=410
Score = 64.7 bits (156), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 51/87 (59%), Gaps = 4/87 (5%)
Query 5 FDPLSLLSPGISAIGSIVGGLFGKKGSDNAAKAQLQIARETNANNYRIAQENNAFNERMV 64
DPLS + G+ A+ S VG +FG S++ ++I R N N R A++ + M
Sbjct 47 LDPLSAIGVGLGAV-SGVGNIFGSALSNSQ---NMKINRMNNEFNAREAEKARQYQSEMW 102
Query 65 DKMNDWNSAKNQRARLEEAGLNPYLML 91
+K NDWNS KN R RL+EAG NPYL L
Sbjct 103 NKTNDWNSPKNVRKRLQEAGYNPYLGL 129
> Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2
Length=353
Score = 60.5 bits (145), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 11/60 (18%)
Query 43 RETNANNYRIAQENNAFNERMV-----------DKMNDWNSAKNQRARLEEAGLNPYLML 91
+ETN NY+I Q NN FNERM +K N +N+A QR RLEEAGLNPYLM+
Sbjct 29 KETNQMNYKINQMNNQFNERMAMQQRDFQENMWNKENTYNTASAQRQRLEEAGLNPYLMM 88
> Alpavirinae_Human_gut_33_005_Microviridae_AG0182_hypothetical.protein.BACEGG.02723
Length=354
Score = 57.8 bits (138), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 0/63 (0%)
Query 29 KGSDNAAKAQLQIARETNANNYRIAQENNAFNERMVDKMNDWNSAKNQRARLEEAGLNPY 88
K D K QL++ + N +Q++ F + M D N+WNSAKNQRARLE AGLNPY
Sbjct 24 KQGDKNRKHQLEMQQIQNEWASSESQKSRDFAKSMFDATNEWNSAKNQRARLEAAGLNPY 83
Query 89 LML 91
LM+
Sbjct 84 LMM 86
> Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.protein.BACEGG.02723
Length=397
Score = 54.3 bits (129), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 0/39 (0%)
Query 53 AQENNAFNERMVDKMNDWNSAKNQRARLEEAGLNPYLML 91
AQ+N F M +K N++NSA NQRARLEEAGLNPY+M+
Sbjct 24 AQKNRDFEVDMWNKTNEYNSATNQRARLEEAGLNPYMMM 62
> Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.protein.BACPLE
Length=383
Score = 47.0 bits (110), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (58%), Gaps = 7/76 (9%)
Query 15 ISAIGSIVGGLFGKKGSDNAAKAQLQIARETNANNYRIAQENNAFNERMVDKMNDWNSAK 74
ISAIGS G +K S A + + + ARE R+AQ+ + E+M +K N +NS
Sbjct 34 ISAIGSFFGNKSNRKQSAEAFERESKFAREE-----RLAQQQ--WIEQMYEKNNSYNSPA 86
Query 75 NQRARLEEAGLNPYLM 90
Q RL+EAGLNP LM
Sbjct 87 AQMQRLKEAGLNPDLM 102
> Gokush_Pavin_110_Microviridae_AG052_putative.VP2
Length=257
Score = 45.8 bits (107), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (51%), Gaps = 19/79 (24%)
Query 11 LSPGISAIGSIVGGLFGKKGSDNAAKAQLQIARETNANNYRIAQENNAFNERMVDKMNDW 70
L+P I++ + VGG G++ ETN N +IA EN AF ERM +
Sbjct 5 LTPEIASAAATVGGFLGQQ--------------ETNTTNRQIASENTAFQERMSN----- 45
Query 71 NSAKNQRARLEEAGLNPYL 89
+ + Q A ++ AGLNP L
Sbjct 46 TAYQRQVADMQAAGLNPML 64
> Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.BACEGG.02723
Length=407
Score = 43.9 bits (102), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (48%), Gaps = 42/204 (21%)
Query 55 ENNAFNERMVDKMNDWNSAKNQRARLEEAGLNPYLMLdggsagtattaptadtssVQSAP 114
+NN E+++ + N +N+ Q AR+ +AGLNPY+ML ++G ++ + S+P
Sbjct 84 KNNQRQEQLIHEQNAYNAPDQQVARMRQAGLNPYMMLGQVNSGNQSSIAST------SSP 137
Query 115 DVGSTIasgaqqlgssissaasqisqqVYNSSLQEANVRKANADASSSEQDALLKGIESQ 174
D+ S++ S + +Q + SSL A VR NA+A+ E D K
Sbjct 138 DLNSSV------------SNVNTAAQMIQQSSLVAAQVRDMNAEAAGKEIDNQTK---QD 182
Query 175 FAAQRFLLDLKLKEMQGK-----VSEQDYYYLRDS----MQDRLDSVKFQNTLT----GS 221
F Q+ L+L ++ G+ ++ D Y++ + +Q +D + + LT G+
Sbjct 183 FNLQQ--LELLRSQVNGQSIVNNAAQYDLEYMKPAQLQELQGNIDRIAHETALTMQKVGT 240
Query 222 QSSYYNQMAGLVDVQRQIEKTNLD 245
+S Q+ +QIE+ LD
Sbjct 241 ESLNQEQLI------KQIEQLGLD 258
> Alpavirinae_Human_feces_D_015_Microviridae_AG018_hypothetical.protein.BACEGG.02723
Length=427
Score = 42.4 bits (98), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 19/96 (20%)
Query 5 FDPLSLLSPGISAIGSIVGGLFGKKGSDNAAKAQLQIARETNANNYRIAQENNAFNER-- 62
D L S ++ G ++G +FG S +A++Q R+ N N +I Q NN FN +
Sbjct 26 IDSLYSCSCQLAIFG-MIGSVFG---SSLSARSQ----RKANEMNLKINQMNNEFNAKEA 77
Query 63 ---------MVDKMNDWNSAKNQRARLEEAGLNPYL 89
M +K N +N+ QRARLEE G N Y+
Sbjct 78 EKARAFQLDMWNKENAYNTPAAQRARLEEGGYNAYM 113
Lambda K H a alpha
0.314 0.128 0.350 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 32050109