bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-13_CDS_annotation_glimmer3.pl_2_8
Length=67
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.... 47.8 1e-10
Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p... 47.0 2e-10
Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.... 45.8 6e-10
Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.... 44.7 2e-09
Alpavirinae_Human_feces_A_032_Microviridae_AG0218_hypothetical.... 32.0 4e-05
Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.p... 30.4 2e-04
Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.pr... 28.5 8e-04
Alpavirinae_Human_feces_B_023_Microviridae_AG0143_hypothetical.... 25.0 0.020
Gokush_gi|12085136|ref|NP_073538.1|_major_capsid_protein_[Bdell... 18.9 9.3
> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68
Score = 47.8 bits (112), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 23/35 (66%), Positives = 29/35 (83%), Gaps = 0/35 (0%)
Query 31 QSCTMSMSIAKNNNNATQQTEQKATSEVKNDSINL 65
QSCTMS+S+AKNNNNA+Q+TEQ TS V + IN+
Sbjct 29 QSCTMSLSVAKNNNNASQKTEQTTTSSVDSTHINI 63
> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68
Score = 47.0 bits (110), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 22/35 (63%), Positives = 30/35 (86%), Gaps = 0/35 (0%)
Query 31 QSCTMSMSIAKNNNNATQQTEQKATSEVKNDSINL 65
QSCTMS+S+AKNNNNA+Q+TEQ +TS + + IN+
Sbjct 29 QSCTMSLSVAKNNNNASQKTEQTSTSSIDSTKINI 63
> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67
Score = 45.8 bits (107), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 22/35 (63%), Positives = 29/35 (83%), Gaps = 0/35 (0%)
Query 31 QSCTMSMSIAKNNNNATQQTEQKATSEVKNDSINL 65
QSCTMS+S+AKNN N+TQ+TEQ +TS V + IN+
Sbjct 29 QSCTMSLSVAKNNQNSTQKTEQTSTSSVDSTKINI 63
> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65
Score = 44.7 bits (104), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 30/35 (86%), Gaps = 0/35 (0%)
Query 31 QSCTMSMSIAKNNNNATQQTEQKATSEVKNDSINL 65
QSCTMS+S++KNN+N+TQ+TEQ +TS V + IN+
Sbjct 29 QSCTMSLSVSKNNSNSTQKTEQTSTSSVDSTKINI 63
> Alpavirinae_Human_feces_A_032_Microviridae_AG0218_hypothetical.protein
Length=66
Score = 32.0 bits (71), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 14/36 (39%), Positives = 24/36 (67%), Gaps = 0/36 (0%)
Query 32 SCTMSMSIAKNNNNATQQTEQKATSEVKNDSINLKF 67
C +S++I KNN+N+ Q+ +Q A++ +NDS N
Sbjct 28 GCVISLNIQKNNSNSDQKVDQNASANQENDSTNFNI 63
> Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.protein
Length=64
Score = 30.4 bits (67), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 2/36 (6%)
Query 31 QSCTMSMSIAKNNNNATQQTEQKATSEVKNDSINLK 66
QSCT +MS+ N N+ Q++EQ TS++ DSI ++
Sbjct 27 QSCTATMSVFWKNANSQQKSEQSTTSKI--DSIKIE 60
> Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.protein
Length=52
Score = 28.5 bits (62), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/37 (41%), Positives = 22/37 (59%), Gaps = 0/37 (0%)
Query 31 QSCTMSMSIAKNNNNATQQTEQKATSEVKNDSINLKF 67
QSCT SMS+ N N+ Q ++Q +V + +IN F
Sbjct 16 QSCTASMSVFWKNQNSKQDSQQTTQQKVDSVTINPHF 52
> Alpavirinae_Human_feces_B_023_Microviridae_AG0143_hypothetical.protein
Length=68
Score = 25.0 bits (53), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (56%), Gaps = 2/36 (6%)
Query 32 SCTMSMSIAKNNNNATQQTEQKATSEVKND--SINL 65
SCT +SI KN + +TE K +V D SINL
Sbjct 29 SCTNMLSIQKNVKDGNMRTENKTDGKVSADSTSINL 64
> Gokush_gi|12085136|ref|NP_073538.1|_major_capsid_protein_[Bdellovibrio_phage_phiMH2K]
Length=533
Score = 18.9 bits (37), Expect = 9.3, Method: Composition-based stats.
Identities = 11/24 (46%), Positives = 11/24 (46%), Gaps = 3/24 (13%)
Query 43 NNNATQQTE---QKATSEVKNDSI 63
NN A Q QKA S ND I
Sbjct 240 NNGALSQVTFGGQKAISAAGNDPI 263
Lambda K H a alpha
0.303 0.111 0.293 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3642139