bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-1_CDS_annotation_glimmer3.pl_2_2
Length=219
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.... 251 2e-85
Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.... 183 2e-59
Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.p... 55.5 1e-11
Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.p... 55.5 1e-11
Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4 30.4 0.011
Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1 22.3 4.4
Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.p... 20.4 7.7
> Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.protein
Length=215
Score = 251 bits (640), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/219 (88%), Positives = 202/219 (92%), Gaps = 4/219 (2%)
Query 1 LHRCKNSLHLSRRAlklpikllikslFMEKTPFYRTKAFWTliasiiaalaaYFTVSCSY 60
+HRCKNSL+LSRRALKL IK L FMEKTPFYR KAFWTL+ SIIAALAAYFTVSCSY
Sbjct 1 MHRCKNSLYLSRRALKLFIKSL----FMEKTPFYRNKAFWTLVTSIIAALAAYFTVSCSY 56
Query 61 SRKIFRNGVHHDTVRIESKIKSRDLSCLTTNLGTPSHSLSSSNLELISWKHSSSLAPTMP 120
S+K+FRNG+H+DTVRIESKIK+RDLSCLTTNLGTPSHSLSSSNLEL+SWKHSSSL PTMP
Sbjct 57 SQKVFRNGIHYDTVRIESKIKTRDLSCLTTNLGTPSHSLSSSNLELVSWKHSSSLVPTMP 116
Query 121 STVTTSLSGLPWQIVFGSKPQLIPLSQLRCHFILPSNKDCltlsvtvlsmsstsqtsfss 180
STVTTSL GLPWQIVFGSKPQLI LSQLRC FI PSNKDC T SVTVLSMSSTS TSF S
Sbjct 117 STVTTSLFGLPWQIVFGSKPQLILLSQLRCRFISPSNKDCSTPSVTVLSMSSTSPTSFFS 176
Query 181 ftlaslvlavPLgrsrrggrrkgkprpkvkNIIIGGRHL 219
FTLASLVLAVPLGRSRRGGRRKGKPRPKVKNIIIGGRHL
Sbjct 177 FTLASLVLAVPLGRSRRGGRRKGKPRPKVKNIIIGGRHL 215
> Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.protein
Length=192
Score = 183 bits (465), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/192 (77%), Positives = 164/192 (85%), Gaps = 0/192 (0%)
Query 28 MEKTPFYRTKAFWTliasiiaalaaYFTVSCSYSRKIFRNGVHHDTVRIESKIKSRDLSC 87
MEKTPFYRTKAFWTL+ S+IAALAAYFTVSCSY++K+FR+GVHHDTV++ES IKSR+LSC
Sbjct 1 MEKTPFYRTKAFWTLVTSMIAALAAYFTVSCSYTQKVFRHGVHHDTVKVESIIKSRNLSC 60
Query 88 LTTNLGTPSHSLSSSNLELISWKHSSSLAPTMPSTVTTSLSGLPWQIVFGSKPQLIPLSQ 147
LT NLGTPS SLSSS LEL SWKHSS LAPTMPSTV +S GLP+Q VFGSKPQ IPLS+
Sbjct 61 LTKNLGTPSRSLSSSTLELSSWKHSSPLAPTMPSTVASSPFGLPFQTVFGSKPQSIPLSK 120
Query 148 LRCHFILPSNKDCltlsvtvlsmsstsqtsfssftlaslvlavPLgrsrrggrrkgkprp 207
L H I PSNK+C TLSV S SS SQT SF+LASL AVPLGRSRRGGR KG+PRP
Sbjct 121 LTYHSISPSNKNCSTLSVNASSTSSRSQTFSFSFSLASLAPAVPLGRSRRGGRGKGRPRP 180
Query 208 kvkNIIIGGRHL 219
KVKNI+IGGRHL
Sbjct 181 KVKNIVIGGRHL 192
> Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.protein
Length=190
Score = 55.5 bits (132), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 44/55 (80%), Gaps = 2/55 (4%)
Query 35 RTKAFWTliasiiaalaaYFTVSCSYSRKIFRNGVHHDTVRIESKIKSRD--LSC 87
++K FWTL+A+I+AAL A+FT SC YS +FR GVH+DTVR E +++SR+ +SC
Sbjct 9 KSKKFWTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYRVRSRNALVSC 63
> Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.protein
Length=190
Score = 55.5 bits (132), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 44/55 (80%), Gaps = 2/55 (4%)
Query 35 RTKAFWTliasiiaalaaYFTVSCSYSRKIFRNGVHHDTVRIESKIKSRD--LSC 87
++K FWTL+A+I+AAL A+FT SC YS +FR GVH+DTVR E +++SR+ +SC
Sbjct 9 KSKKFWTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYRVRSRNALVSC 63
> Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4
Length=546
Score = 30.4 bits (67), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 13/47 (28%), Positives = 22/47 (47%), Gaps = 2/47 (4%)
Query 106 LISWKHSSSLAPTMPSTVTTSLSGLPWQIVFGSKPQLIPLSQLRCHF 152
L+ W S A + + S + LP+ + GS P++ P + HF
Sbjct 223 LVDWSQSRGDAESYVAGYVNSFARLPYHL--GSSPKIAPFGRFSNHF 267
> Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1
Length=589
Score = 22.3 bits (46), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 16/35 (46%), Gaps = 0/35 (0%)
Query 120 PSTVTTSLSGLPWQIVFGSKPQLIPLSQLRCHFIL 154
P+ ++ GL VFG L +S +FIL
Sbjct 418 PALDNIAMQGLKASTVFGEVQNLSAISTTYANFIL 452
> Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.protein
Length=79
Score = 20.4 bits (41), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 4/37 (11%)
Query 87 CLTTNLGTPSH----SLSSSNLELISWKHSSSLAPTM 119
L +L TP H + +++E + W +SLA ++
Sbjct 27 TLGDHLATPEHFKSYDEAENSIEAVDWNLVASLAMSL 63
Lambda K H a alpha
0.322 0.133 0.421 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 16950164