bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-1_CDS_annotation_glimmer3.pl_2_5
Length=133
Score E
Sequences producing significant alignments: (Bits) Value
Microvirus_gi|89888097|ref|YP_512790.1|_gpB_[Enterobacteria_pha... 23.1 0.79
Gokush_JCVI_001_Microviridae_AG021_putative.VP4 23.1 0.95
Gokush_Human_gut_37_015_Microviridae_AG033_putative.VP1 22.3 1.8
Gokush_Human_gut_36_019_Microviridae_AG0279_putative.VP1 22.3 1.8
Gokush_Human_gut_35_025_Microviridae_AG0361_putative.VP1 22.3 1.8
Gokush_Human_gut_34_012_Microviridae_AG058_putative.VP1 22.3 1.8
Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2 21.9 2.2
Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2 21.9 2.2
Gokush_Human_feces_A_020_Microviridae_AG0266_putative.nonstruct... 20.0 5.4
Gokush_Human_feces_A_019_Microviridae_AG0441_putative.nonstruct... 20.0 5.9
> Microvirus_gi|89888097|ref|YP_512790.1|_gpB_[Enterobacteria_phage_ID18_sensu_lato]
Length=120
Score = 23.1 bits (48), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/32 (41%), Positives = 16/32 (50%), Gaps = 4/32 (13%)
Query 19 SQRVGIRSCADQ----HASYHVRNCVSQPDEF 46
S+R G +C DQ HA + N QP EF
Sbjct 75 SRRFGGATCDDQSAKIHAQFDPNNRSVQPTEF 106
> Gokush_JCVI_001_Microviridae_AG021_putative.VP4
Length=297
Score = 23.1 bits (48), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/52 (27%), Positives = 23/52 (44%), Gaps = 9/52 (17%)
Query 57 LEEYYTFGFLSCDTQAVRGDSAYDEIQPSGKDASFLSTDPSSDFSLDKFERI 108
LEE + FGF S +Q +G A ++ + DF+ +ER+
Sbjct 147 LEELWPFGFSSIGNVT---------MQSAGYVARYVMKKMTGDFAKKWYERV 189
> Gokush_Human_gut_37_015_Microviridae_AG033_putative.VP1
Length=582
Score = 22.3 bits (46), Expect = 1.8, Method: Composition-based stats.
Identities = 12/32 (38%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query 70 TQAVRGDSAYDEIQPSGKDASFLSTDPSSDFS 101
T+A+RGD Y P+G ++ L P +D S
Sbjct 301 TRAIRGDGFY---FPNGILSNSLGQQPYADLS 329
> Gokush_Human_gut_36_019_Microviridae_AG0279_putative.VP1
Length=582
Score = 22.3 bits (46), Expect = 1.8, Method: Composition-based stats.
Identities = 12/32 (38%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query 70 TQAVRGDSAYDEIQPSGKDASFLSTDPSSDFS 101
T+A+RGD Y P+G ++ L P +D S
Sbjct 301 TRAIRGDGFY---FPNGILSNSLGQQPYADLS 329
> Gokush_Human_gut_35_025_Microviridae_AG0361_putative.VP1
Length=582
Score = 22.3 bits (46), Expect = 1.8, Method: Composition-based stats.
Identities = 12/32 (38%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query 70 TQAVRGDSAYDEIQPSGKDASFLSTDPSSDFS 101
T+A+RGD Y P+G ++ L P +D S
Sbjct 301 TRAIRGDGFY---FPNGILSNSLGQQPYADLS 329
> Gokush_Human_gut_34_012_Microviridae_AG058_putative.VP1
Length=582
Score = 22.3 bits (46), Expect = 1.8, Method: Composition-based stats.
Identities = 12/32 (38%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query 70 TQAVRGDSAYDEIQPSGKDASFLSTDPSSDFS 101
T+A+RGD Y P+G ++ L P +D S
Sbjct 301 TRAIRGDGFY---FPNGILSNSLGQQPYADLS 329
> Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2
Length=364
Score = 21.9 bits (45), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 98 SDFSLDKFERIERIAECVGETS 119
+D +L +RI+ +AE G+T+
Sbjct 146 ADIALKDAQRIKTLAEAKGQTN 167
> Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2
Length=364
Score = 21.9 bits (45), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 98 SDFSLDKFERIERIAECVGETS 119
+D +L +RI+ +AE G+T+
Sbjct 146 ADIALKDAQRIKTLAEAKGQTN 167
> Gokush_Human_feces_A_020_Microviridae_AG0266_putative.nonstructural.protein
Length=71
Score = 20.0 bits (40), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/73 (33%), Positives = 36/73 (49%), Gaps = 15/73 (21%)
Query 64 GFLSC-DTQAVRG--DSAYDEIQPSGKDASFLSTDPSSDFSLDKFERIERIAECVGETSA 120
GF S D A+R D+ DE Q GK+A D++L K + + ++ GE
Sbjct 3 GFESVNDGTAIRAFKDACNDENQ-LGKNAK--------DYTLFKVAKFDDVS---GEYWN 50
Query 121 ERHKEELGKQNDK 133
++HK + GKQ K
Sbjct 51 DKHKLQDGKQKAK 63
> Gokush_Human_feces_A_019_Microviridae_AG0441_putative.nonstructural.protein
Length=87
Score = 20.0 bits (40), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/105 (28%), Positives = 48/105 (46%), Gaps = 30/105 (29%)
Query 31 HASYHVRNCVSQPDEFIVGARSMNEILEEYYTFGFLSCDTQAVRG--DSAYDEIQPSGKD 88
H Y VR+ V++ +F+ G S+N D A+R D+ DE Q GK+
Sbjct 3 HNIYSVRDNVAE--QFMGGFESVN--------------DGTAIRAFKDACNDENQ-LGKN 45
Query 89 ASFLSTDPSSDFSLDKFERIERIAECVGETSAERHKEELGKQNDK 133
A D++L K + + + GE ++HK + GK++ K
Sbjct 46 AK--------DYTLFK---VAKFDDESGEYWNDKHKLQDGKRDTK 79
Lambda K H a alpha
0.315 0.131 0.383 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 8244693