bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-1_CDS_annotation_glimmer3.pl_2_7
Length=237
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.... 270 1e-92
Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.... 221 9e-74
Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.p... 65.5 5e-15
Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.p... 65.5 5e-15
Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.p... 20.4 8.0
> Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.protein
Length=215
Score = 270 bits (690), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/219 (87%), Positives = 202/219 (92%), Gaps = 4/219 (2%)
Query 19 LHRCKNSLYSPRRAlklfiklfikslfMEKTPFYRNKAFWTLVTSIIAAFAAYFTVSCSY 78
+HRCKNSLY RRALKLFIK MEKTPFYRNKAFWTLVTSIIAA AAYFTVSCSY
Sbjct 1 MHRCKNSLYLSRRALKLFIKSLF----MEKTPFYRNKAFWTLVTSIIAALAAYFTVSCSY 56
Query 79 TQKVFRHGVHHDTVKVESVIKSRNLSCLTKNLGTPSHSLSSSNLELISWKHSSSLAPTMP 138
+QKVFR+G+H+DTV++ES IK+R+LSCLT NLGTPSHSLSSSNLEL+SWKHSSSL PTMP
Sbjct 57 SQKVFRNGIHYDTVRIESKIKTRDLSCLTTNLGTPSHSLSSSNLELVSWKHSSSLVPTMP 116
Query 139 STVTTSLFGLPWQIVFGSKPQLILLSRLRCHFISPSNKDCstpsvtvlsmsstsqtsfss 198
STVTTSLFGLPWQIVFGSKPQLILLS+LRC FISPSNKDCSTPSVTVLSMSSTS TSF S
Sbjct 117 STVTTSLFGLPWQIVFGSKPQLILLSQLRCRFISPSNKDCSTPSVTVLSMSSTSPTSFFS 176
Query 199 ftlaslvlavPLgrsrrggrrkgkpspkVKNIIIGGRHL 237
FTLASLVLAVPLGRSRRGGRRKGKP PKVKNIIIGGRHL
Sbjct 177 FTLASLVLAVPLGRSRRGGRRKGKPRPKVKNIIIGGRHL 215
> Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.protein
Length=192
Score = 221 bits (562), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 156/192 (81%), Positives = 165/192 (86%), Gaps = 0/192 (0%)
Query 46 MEKTPFYRNKAFWTLVTSIIAAFAAYFTVSCSYTQKVFRHGVHHDTVKVESVIKSRNLSC 105
MEKTPFYR KAFWTLVTS+IAA AAYFTVSCSYTQKVFRHGVHHDTVKVES+IKSRNLSC
Sbjct 1 MEKTPFYRTKAFWTLVTSMIAALAAYFTVSCSYTQKVFRHGVHHDTVKVESIIKSRNLSC 60
Query 106 LTKNLGTPSHSLSSSNLELISWKHSSSLAPTMPSTVTTSLFGLPWQIVFGSKPQLILLSR 165
LTKNLGTPS SLSSS LEL SWKHSS LAPTMPSTV +S FGLP+Q VFGSKPQ I LS+
Sbjct 61 LTKNLGTPSRSLSSSTLELSSWKHSSPLAPTMPSTVASSPFGLPFQTVFGSKPQSIPLSK 120
Query 166 LRCHFISPSNKDCstpsvtvlsmsstsqtsfssftlaslvlavPLgrsrrggrrkgkpsp 225
L H ISPSNK+CST SV S SS SQT SF+LASL AVPLGRSRRGGR KG+P P
Sbjct 121 LTYHSISPSNKNCSTLSVNASSTSSRSQTFSFSFSLASLAPAVPLGRSRRGGRGKGRPRP 180
Query 226 kVKNIIIGGRHL 237
KVKNI+IGGRHL
Sbjct 181 KVKNIVIGGRHL 192
> Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.protein
Length=190
Score = 65.5 bits (158), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 29/55 (53%), Positives = 41/55 (75%), Gaps = 2/55 (4%)
Query 53 RNKAFWTLVTSIIAAFAAYFTVSCSYTQKVFRHGVHHDTVKVESVIKSRN--LSC 105
++K FWTLV +I+AA A+FT SC Y+ +FR GVH+DTV+ E ++SRN +SC
Sbjct 9 KSKKFWTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYRVRSRNALVSC 63
> Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.protein
Length=190
Score = 65.5 bits (158), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 29/55 (53%), Positives = 41/55 (75%), Gaps = 2/55 (4%)
Query 53 RNKAFWTLVTSIIAAFAAYFTVSCSYTQKVFRHGVHHDTVKVESVIKSRN--LSC 105
++K FWTLV +I+AA A+FT SC Y+ +FR GVH+DTV+ E ++SRN +SC
Sbjct 9 KSKKFWTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYRVRSRNALVSC 63
> Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.protein
Length=79
Score = 20.4 bits (41), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 4/37 (11%)
Query 105 CLTKNLGTPSH----SLSSSNLELISWKHSSSLAPTM 137
L +L TP H + +++E + W +SLA ++
Sbjct 27 TLGDHLATPEHFKSYDEAENSIEAVDWNLVASLAMSL 63
Lambda K H a alpha
0.322 0.132 0.420 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 18722961