bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-21_CDS_annotation_glimmer3.pl_2_8
Length=286
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_016_Microviridae_AG0275_hypothetical.... 356 4e-124
Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2 48.1 3e-08
Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2 48.1 3e-08
Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein... 35.4 3e-04
Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.... 34.3 0.001
Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypotheti... 32.0 0.004
Gokush_Bourget_245_Microviridae_AG081_putative.VP2 30.0 0.016
Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.p... 30.4 0.016
Alpavirinae_Human_feces_D_022_Microviridae_AG0391_hypothetical.... 29.3 0.034
Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.... 27.3 0.12
> Alpavirinae_Human_feces_C_016_Microviridae_AG0275_hypothetical.protein.HMPREF9141.0987
Length=335
Score = 356 bits (914), Expect = 4e-124, Method: Compositional matrix adjust.
Identities = 193/284 (68%), Positives = 232/284 (82%), Gaps = 12/284 (4%)
Query 1 MNKPSRQVAKWRSAGIAPQAVFGNSPGGAGIVTDASTPNSQTPMGSSDFNFVTTIAERQR 60
MNKPSRQVAKWRSAGIAPQAVFGNSPGGAGI TDAS+PNSQTPMGSSDFNFVTTIAERQR
Sbjct 49 MNKPSRQVAKWRSAGIAPQAVFGNSPGGAGIATDASSPNSQTPMGSSDFNFVTTIAERQR 108
Query 61 MKNEKAIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEIN 120
MKNEKAIADATV+KLNAEA KLRGDTKDP VTKD Q+LEFDWN+VKKQREQVQL VDEI+
Sbjct 109 MKNEKAIADATVDKLNAEAGKLRGDTKDPKVTKDLQQLEFDWNIVKKQREQVQLDVDEID 168
Query 121 KEFQRAINEADVQIKHGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDLIESQISATQAQ 180
KEF+RA+NEAD+QIK G+YSETL+KIDKLIADK+VSEEM++NLQKQRDLI +QI +T+AQ
Sbjct 169 KEFRRAVNEADLQIKRGIYSETLSKIDKLIADKEVSEEMRRNLQKQRDLIVAQIDSTKAQ 228
Query 181 TDLIKaqtsatqaqtETENALRDGRIKLTEREANKILADIGLSEARSLNE-YESLIK--- 236
TDL KAQT ++AQT+TE+ LR GR++LT + ++L+ GL++ R E YE+ ++
Sbjct 229 TDLSKAQTGLSKAQTKTEDDLRKGRVRLTGAQTTEVLSMAGLNDVRRDREKYETFLRLLD 288
Query 237 ---AMTGTQPASSLWGYIDRLIARGDSRLGGYENA--SDLREKL 275
A G + A + I +L+ R ++ L Y+ SD EK+
Sbjct 289 IDDASNGAEFAQRI---IRQLLGRFNTDLSDYKQKMISDYLEKI 329
> Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2
Length=364
Score = 48.1 bits (113), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/262 (31%), Positives = 120/262 (46%), Gaps = 43/262 (16%)
Query 13 SAGIAPQAVFGNSPGGAGIVTDASTPNSQTPM-----GSSDFNFVTTIAERQRMKN---E 64
++G A A G+ PG S P PM G+S + +RQ MKN +
Sbjct 98 NSGSAQAAQGGDVPG--------SGPYQMNPMSALQSGASSI-IQNAMLDRQ-MKNADAD 147
Query 65 KAIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQ 124
A+ DA K AEA +G T + ++ + ++ L K+ R ++ D++N EF
Sbjct 148 IALKDAQRIKTLAEA---KGQTNENSLFEFARSAAESDALSKRFRAEL----DKVNAEFA 200
Query 125 RAINEADVQIKHGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDL-----------IESQ 173
+A EAD+ + L E +++ +A ++ + + RDL ESQ
Sbjct 201 QAFAEADISQRKALLQEIWSRVKNNLAQAARTDADRLTIDTIRDLQAKALGAGISLTESQ 260
Query 174 ISATQAQTDLIKaqtsatqaqtETENALRDGRIKLTEREANKILADIGLSEARSLNEYES 233
SATQAQT L +AQT ETEN LR R LT+ + N+I I S + E
Sbjct 261 TSATQAQTGLTQAQT-------ETENQLRKLRKALTQNQINEITQKIRSSRVVTAEGIER 313
Query 234 LIKAMTGTQPASSLWGYIDRLI 255
L + G + A SL+G ID+ I
Sbjct 314 LTAWLRGDREAGSLFGLIDKYI 335
> Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2
Length=364
Score = 48.1 bits (113), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/262 (31%), Positives = 120/262 (46%), Gaps = 43/262 (16%)
Query 13 SAGIAPQAVFGNSPGGAGIVTDASTPNSQTPM-----GSSDFNFVTTIAERQRMKN---E 64
++G A A G+ PG S P PM G+S + +RQ MKN +
Sbjct 98 NSGSAQAAQGGDVPG--------SGPYQMNPMSALQSGASSI-IQNAMLDRQ-MKNADAD 147
Query 65 KAIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINKEFQ 124
A+ DA K AEA +G T + ++ + ++ L K+ R ++ D++N EF
Sbjct 148 IALKDAQRIKTLAEA---KGQTNENSLFEFARSAAESDALSKRFRAEL----DKVNAEFA 200
Query 125 RAINEADVQIKHGLYSETLAKIDKLIADKDVSEEMKQNLQKQRDL-----------IESQ 173
+A EAD+ + L E +++ +A ++ + + RDL ESQ
Sbjct 201 QAFAEADISQRKALLQEIWSRVKNNLAQAARTDADRLTIDTIRDLQAKALGAGISLTESQ 260
Query 174 ISATQAQTDLIKaqtsatqaqtETENALRDGRIKLTEREANKILADIGLSEARSLNEYES 233
SATQAQT L +AQT ETEN LR R LT+ + N+I I S + E
Sbjct 261 TSATQAQTGLTQAQT-------ETENQLRKLRKALTQNQINEITQKIRSSRVVTAEGIER 313
Query 234 LIKAMTGTQPASSLWGYIDRLI 255
L + G + A SL+G ID+ I
Sbjct 314 LTAWLRGDREAGSLFGLIDKYI 335
> Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein.BACEGG.02723
Length=266
Score = 35.4 bits (80), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query 2 NKPSRQVAKWRSAGIAPQAVFGNSPGGAGI-VTDASTPNSQTP----MGSSDFNFVTTIA 56
N PS+Q+ +++ AG+ P ++G A I TD P+ P G N++
Sbjct 57 NSPSQQMQRYKEAGLNPNLIYGQMSNSAAIRSTDMKQPDFVAPKLQNTGQVMNNYIDLKL 116
Query 57 ERQRMKNEK 65
+ Q++ N+K
Sbjct 117 KEQQLSNDK 125
> Alpavirinae_CF7ML_001_Microviridae_AG0310_hypothetical.protein.BACEGG.02723
Length=407
Score = 34.3 bits (77), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (31%), Positives = 39/78 (50%), Gaps = 7/78 (9%)
Query 2 NKPSRQVAKWRSAGIAPQAVFGNSPGGAGIVTDASTPNSQTPMGSSDFNFVTTIAERQRM 61
N P +QVA+ R AG+ P + G G +S ++ +P +S + V T A+ M
Sbjct 100 NAPDQQVARMRQAGLNPYMMLGQVNSG----NQSSIASTSSPDLNSSVSNVNTAAQ---M 152
Query 62 KNEKAIADATVNKLNAEA 79
+ ++ A V +NAEA
Sbjct 153 IQQSSLVAAQVRDMNAEA 170
> Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypothetical.protein.BACEGG.02723
Length=275
Score = 32.0 bits (71), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (55%), Gaps = 2/42 (5%)
Query 2 NKPSRQVAKWRSAGIAPQAVFGNSPGGAGIVTDASTPNSQTP 43
N P Q+ +++ AG+ P ++G G AG + S P+ Q P
Sbjct 47 NLPINQMQRFKDAGLNPHLIYGQ--GNAGNASPISLPDRQDP 86
> Gokush_Bourget_245_Microviridae_AG081_putative.VP2
Length=242
Score = 30.0 bits (66), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/129 (21%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query 6 RQVAKWRSAGIAPQAVF---GNSPGGAGIVTDASTPNSQTPM-GSSDFNFVTTIAERQRM 61
RQV +SAG+ P + G + AG A +P+ G++ + + A +
Sbjct 61 RQVEDMKSAGLNPMLAYIKGGGASSPAGSTGQAVNAQYTSPIQGAASYRLTSAQAAK--- 117
Query 62 KNEKAIADATVNKLNAEAEKLRGDTKDPNVTKDSQRLEFDWNLVKKQREQVQLAVDEINK 121
EAEK + + + N+ K S++++ + + +K +E+++ + + +
Sbjct 118 ---------------TEAEKPKVEAETSNIVKTSEKIDQEISNLKTDQERIKAVILNLAE 162
Query 122 EFQRAINEA 130
E Q IN+
Sbjct 163 ERQNLINQG 171
> Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.protein.BACEGG.02723
Length=383
Score = 30.4 bits (67), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 21/94 (22%)
Query 2 NKPSRQVAKWRSAGIAPQAVFGNSPGGAGIV---------------TDASTPNSQTPMGS 46
N PS +++ + AG+ P ++GN G AG+V D + P TP
Sbjct 80 NSPSTVMSRLKDAGLNPDLIYGN--GAAGLVDSNVAGTAPVSSVPPADVAGPIMATPTAM 137
Query 47 SDF----NFVTTIAERQRMKNEKAIADATVNKLN 76
+ T+AE + +K + + + V LN
Sbjct 138 ESLFQGAAYAKTLAETKNIKADTSKKEGEVTSLN 171
> Alpavirinae_Human_feces_D_022_Microviridae_AG0391_hypothetical.protein.BACEGG.02723
Length=367
Score = 29.3 bits (64), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 110/279 (39%), Gaps = 32/279 (11%)
Query 2 NKPSRQVAKWRSAGIAPQAVFGN------SPGGAGIVTDASTPNSQT---PMGSSDFNFV 52
N P+ Q +AG+ P A G PG G STP++Q+ P G V
Sbjct 71 NSPAAQRRARVAAGLTPYADVGGIQTSSVDPGSYG----GSTPSAQSFTQPGGIPTSPLV 126
Query 53 TTIAERQRMKNEKAIADATVNKLNAEAEKLRGDT---KDPNVTKDSQRLEFDWNLVKKQR 109
+ A+A + ++A K R +T ++ N D + +L KQ
Sbjct 127 GAFGNATQQTLSALQAEANIELTKSQALKTRAETTGLENTNSMFDIVKSIASEDLTSKQF 186
Query 110 EQVQLAVDEINKEFQRAINEADVQIKHGLYSET-------LAKIDKLIADKDVSEEM--- 159
+ + EI ++ A AD+ K E LA K AD+ E +
Sbjct 187 NNI---LKEIETKYAEANAIADLDTKQAKIGEINASALERLASAAKTDADRITVELLRDA 243
Query 160 -KQNLQKQRDLIESQISATQAQTDL-IKaqtsatqaqtETENALRDGRIKLTEREANKIL 217
K++L+ L E+Q +AT+ L +K T AQ ETE LR + +LT ++A
Sbjct 244 QKRSLEAGASLAEAQ-AATEPHRALNLKQDTLLKMAQEETEQLLRSQKFELTRQQARAAA 302
Query 218 ADIGLSEARSLNEYESLIKAMTGTQPASSLWGYIDRLIA 256
+ + E L + + ++W I RL++
Sbjct 303 MSFVQERILTYRQAEELARYLANIHDPKNMWDGIWRLVS 341
> Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.BACEGG.02723
Length=252
Score = 27.3 bits (59), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/93 (27%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query 2 NKPSRQVAKWRSAGIAPQAVFGN-SPGGAGIVTDASTPNSQTPMGSS-------DFNFVT 53
N P +Q+ + + AG+ P+ +G + AG V S P+GS+ D F +
Sbjct 59 NSPEQQMQRLKEAGLNPKLAYGTLADSKAGNV------RSHAPIGSTFVETPKFDDPFQS 112
Query 54 TIAERQRMKNEKAIADATVNKLNAEAEK-LRGD 85
+ Q KN + DA N+ + + K +R D
Sbjct 113 VLGATQAYKN---VIDANKNQFDLDLNKEMRTD 142
Lambda K H a alpha
0.311 0.127 0.342 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 23618338