bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-24_CDS_annotation_glimmer3.pl_2_6

Length=66
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical....  61.6    3e-15
  Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical....  61.2    4e-15
  Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.p...  41.2    1e-07
  Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.p...  41.2    1e-07
  unnamed protein product                                             19.2    5.0


> Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.protein
Length=215

 Score = 61.6 bits (148),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 30/54 (56%), Positives = 39/54 (72%), Gaps = 4/54 (7%)

Query  9   MEKVPFYRKKSFWTLLISILTALSVYFAASC--SRKVFYRSSGIHCDTVEVDVR  60
           MEK PFYR K+FWTL+ SI+ AL+ YF  SC  S+KVF   +GIH DTV ++ +
Sbjct  24  MEKTPFYRNKAFWTLVTSIIAALAAYFTVSCSYSQKVF--RNGIHYDTVRIESK  75


> Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.protein
Length=192

 Score = 61.2 bits (147),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 29/52 (56%), Positives = 38/52 (73%), Gaps = 4/52 (8%)

Query  9   MEKVPFYRKKSFWTLLISILTALSVYFAASCS--RKVFYRSSGIHCDTVEVD  58
           MEK PFYR K+FWTL+ S++ AL+ YF  SCS  +KVF    G+H DTV+V+
Sbjct  1   MEKTPFYRTKAFWTLVTSMIAALAAYFTVSCSYTQKVFRH--GVHHDTVKVE  50


> Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.protein
Length=190

 Score = 41.2 bits (95),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 0/45 (0%)

Query  16  RKKSFWTLLISILTALSVYFAASCSRKVFYRSSGIHCDTVEVDVR  60
           + K FWTL+ +I+ AL+ +F ASC        +G+H DTV  + R
Sbjct  9   KSKKFWTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYR  53


> Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.protein
Length=190

 Score = 41.2 bits (95),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 0/45 (0%)

Query  16  RKKSFWTLLISILTALSVYFAASCSRKVFYRSSGIHCDTVEVDVR  60
           + K FWTL+ +I+ AL+ +F ASC        +G+H DTV  + R
Sbjct  9   KSKKFWTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYR  53


> unnamed protein product
Length=128

 Score = 19.2 bits (38),  Expect = 5.0, Method: Compositional matrix adjust.
 Identities = 8/29 (28%), Positives = 14/29 (48%), Gaps = 0/29 (0%)

Query  32  SVYFAASCSRKVFYRSSGIHCDTVEVDVR  60
           S Y   + ++KV    +  HC  +  D+R
Sbjct  57  SGYRTPAWNKKVGGAENSYHCKGMAADIR  85



Lambda      K        H        a         alpha
   0.331    0.138    0.439    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3658814