bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-25_CDS_annotation_glimmer3.pl_2_2
Length=76
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1 120 2e-35
Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1 110 9e-32
Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1 110 9e-32
Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1 110 9e-32
Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 101 1e-28
Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 100 1e-27
Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 99.8 1e-27
Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 99.4 2e-27
Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1 93.2 3e-25
Gokush_Human_feces_C_014_Microviridae_AG0148_putative.VP1 84.3 3e-22
> Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1
Length=541
Score = 120 bits (301), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 53/76 (70%), Positives = 62/76 (82%), Gaps = 0/76 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MRPGV NSLA+W+LADHY PTLSD WIRED +NVDR LAV S V++QFW D++I N C
Sbjct 466 MRPGVQNSLAYWNLADHYTSEPTLSDEWIREDVSNVDRALAVTSDVSNQFWADIYIRNKC 525
Query 61 TRPMPMYSIPGSLDHF 76
TR MPMYS+PG +DHF
Sbjct 526 TRCMPMYSVPGLIDHF 541
> Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1
Length=562
Score = 110 bits (276), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 47/75 (63%), Positives = 60/75 (80%), Gaps = 0/75 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR SL WHLAD Y+ +P+LSD WIREDKAN+DRVLAV S+V++QF+ D+++ N C
Sbjct 487 MRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFFADIYVKNYC 546
Query 61 TRPMPMYSIPGSLDH 75
TRPMPMYS+PG +DH
Sbjct 547 TRPMPMYSVPGLIDH 561
> Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1
Length=562
Score = 110 bits (276), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 47/75 (63%), Positives = 60/75 (80%), Gaps = 0/75 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR SL WHLAD Y+ +P+LSD WIREDKAN+DRVLAV S+V++QF+ D+++ N C
Sbjct 487 MRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFFADIYVKNYC 546
Query 61 TRPMPMYSIPGSLDH 75
TRPMPMYS+PG +DH
Sbjct 547 TRPMPMYSVPGLIDH 561
> Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1
Length=562
Score = 110 bits (276), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 47/75 (63%), Positives = 60/75 (80%), Gaps = 0/75 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR SL WHLAD Y+ +P+LSD WIREDKAN+DRVLAV S+V++QF+ D+++ N C
Sbjct 487 MRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFFADIYVKNYC 546
Query 61 TRPMPMYSIPGSLDH 75
TRPMPMYS+PG +DH
Sbjct 547 TRPMPMYSVPGLIDH 561
> Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1
Length=470
Score = 101 bits (251), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/75 (59%), Positives = 54/75 (72%), Gaps = 0/75 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR L WHLAD Y +PTLSD WIRE+ NV+RVLAV S V++Q +CDL++ N
Sbjct 395 MRSNAKTPLDSWHLADDYDVLPTLSDSWIREESNNVNRVLAVTSEVSNQLFCDLYVQNRT 454
Query 61 TRPMPMYSIPGSLDH 75
TRPMP+YSIPG +DH
Sbjct 455 TRPMPVYSIPGLIDH 469
> Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1
Length=587
Score = 100 bits (248), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 56/75 (75%), Gaps = 0/75 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR SL WHLAD Y+K+P+LS WI+ED + V+RVLA ++A QF+ D+++ N+C
Sbjct 512 MRSSYAKSLDIWHLADDYSKLPSLSAEWIQEDSSTVNRVLAASDNLAAQFFADIYVKNLC 571
Query 61 TRPMPMYSIPGSLDH 75
TRPMPMYSIPG +DH
Sbjct 572 TRPMPMYSIPGLIDH 586
> Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1
Length=547
Score = 99.8 bits (247), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 0/75 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR SL WHL D Y +P+LSD WIRED V+RVLAV +V+ Q +CD+++ N+C
Sbjct 472 MRSSAPQSLDVWHLGDDYESLPSLSDSWIREDSKTVNRVLAVSDNVSAQLFCDIYVRNLC 531
Query 61 TRPMPMYSIPGSLDH 75
TRPMP+YSIPG +DH
Sbjct 532 TRPMPLYSIPGLIDH 546
> Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1
Length=559
Score = 99.4 bits (246), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/75 (61%), Positives = 54/75 (72%), Gaps = 0/75 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR SL WHL D Y K+P+LS WI EDK NVDRVLAV S+ A+Q + DL+I+N
Sbjct 484 MRSQYAQSLDVWHLGDDYTKLPSLSSEWIVEDKTNVDRVLAVTSTNANQLFADLYINNQT 543
Query 61 TRPMPMYSIPGSLDH 75
TRPMPMYSIPG +DH
Sbjct 544 TRPMPMYSIPGLVDH 558
> Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1
Length=578
Score = 93.2 bits (230), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 0/70 (0%)
Query 6 TNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMCTRPMP 65
T SL WH AD+Y ++P LS WI+E NVDR LAVQS++ DQ+ D W CTRPMP
Sbjct 508 TGSLDAWHYADYYEELPKLSAEWIQETYKNVDRTLAVQSTLEDQYIADFWFKCKCTRPMP 567
Query 66 MYSIPGSLDH 75
+YSIPG +DH
Sbjct 568 IYSIPGLIDH 577
> Gokush_Human_feces_C_014_Microviridae_AG0148_putative.VP1
Length=566
Score = 84.3 bits (207), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 46/71 (65%), Gaps = 0/71 (0%)
Query 1 MRPGVTNSLAHWHLADHYAKVPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMC 60
MR SL WH AD Y K+PTLS WI+E + N+DR +AV S+V+ QF CD W +
Sbjct 492 MRSNYQTSLDAWHYADDYDKLPTLSAEWIQEGRENIDRTIAVTSAVSHQFLCDFWFNETW 551
Query 61 TRPMPMYSIPG 71
R MP+YSIPG
Sbjct 552 FREMPIYSIPG 562
Lambda K H a alpha
0.323 0.134 0.466 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3629730