bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-28_CDS_annotation_glimmer3.pl_2_1
Length=162
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_A_029_Microviridae_AG0224_putative.VP3 145 8e-46
Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3 130 7e-40
Gokush_Human_gut_32_030_Microviridae_AG0187_putative.VP3 129 9e-40
Gokush_Human_gut_31_045_Microviridae_AG0116_putative.VP3 129 9e-40
Gokush_Human_gut_27_035_Microviridae_AG0165_putative.VP3 129 9e-40
Gokush_Human_feces_E_009_Microviridae_AG0284_putative.VP3 122 4e-37
Gokush_Human_feces_D_014_Microviridae_AG028_putative.VP3 68.2 1e-16
Gokush_Human_feces_B_068_Microviridae_AG0330_putative.VP3 65.9 3e-16
Gokush_Human_feces_D_045_Microviridae_AG0400_putative.VP3 65.5 6e-16
Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein 61.2 4e-14
> Gokush_Human_feces_A_029_Microviridae_AG0224_putative.VP3
Length=162
Score = 145 bits (366), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 69/136 (51%), Positives = 93/136 (68%), Gaps = 0/136 (0%)
Query 1 MRKFRTQFDEHPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDIN 60
M F QF +H R+ GSR K Y R++ G ++L EKG+E+ Y YIQS+KDSVDI+
Sbjct 1 MITFENQFRDHKRFLTGVGSREKITYEARYNAKGQLELNEKGKEDWYGYIQSHKDSVDIH 60
Query 61 TLLRRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSF 120
LL R+ +GD D L+RVQ YGD T PST+AD LN V +++F SLPV+ RA++NH+F
Sbjct 61 VLLERFQRGDVDVLNRVQGFYGDITSYPSTFADALNIVRSSEEFFNSLPVEERAKYNHNF 120
Query 121 SEFMASMDGPDFWRKL 136
SEF+A+ D PD +L
Sbjct 121 SEFLAAFDSPDTLARL 136
> Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3
Length=160
Score = 130 bits (326), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 87/135 (64%), Gaps = 0/135 (0%)
Query 4 FRTQFDEHPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDINTLL 63
FRTQ+D H R G R Y +DE G + L E G + Y IQS+ +SVD++ L+
Sbjct 2 FRTQYDPHDRIHAEPGQREHIRYGGHYDEKGRVVLDEIGRIDTYAEIQSHAESVDLHVLM 61
Query 64 RRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSFSEF 123
RYA+GD DALS+ Q YGD P TYA+ LN +N+ ++ F SLPV++R +F HSF+EF
Sbjct 62 ERYARGDVDALSKAQGFYGDVLDFPKTYAEALNHMNEMERQFMSLPVEIREKFGHSFTEF 121
Query 124 MASMDGPDFWRKLGV 138
+AS + PDF KLG+
Sbjct 122 LASSNEPDFLDKLGI 136
> Gokush_Human_gut_32_030_Microviridae_AG0187_putative.VP3
Length=157
Score = 129 bits (325), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 66/148 (45%), Positives = 93/148 (63%), Gaps = 0/148 (0%)
Query 3 KFRTQFDEHPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDINTL 62
+F+TQ+D R GS YA +DE G + L E G ENLY+YIQSY +S DI+ L
Sbjct 2 EFKTQYDARDRIFSDPGSPEHITYAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVL 61
Query 63 LRRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSFSE 122
++RYA GD DALS+ Q YGDF P TYA+ LN +N+ ++ F +LPV+ R +F +SF+E
Sbjct 62 MKRYANGDVDALSQKQGFYGDFLDFPKTYAEALNHMNEMERQFMALPVETREKFGNSFTE 121
Query 123 FMASMDGPDFWRKLGVVQSAQETPSPGC 150
F+A+ DF+ KLG+ + +P
Sbjct 122 FLAASGEADFFDKLGIKAEEPKEVTPAI 149
> Gokush_Human_gut_31_045_Microviridae_AG0116_putative.VP3
Length=157
Score = 129 bits (325), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 66/148 (45%), Positives = 93/148 (63%), Gaps = 0/148 (0%)
Query 3 KFRTQFDEHPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDINTL 62
+F+TQ+D R GS YA +DE G + L E G ENLY+YIQSY +S DI+ L
Sbjct 2 EFKTQYDARDRIFSDPGSPEHITYAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVL 61
Query 63 LRRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSFSE 122
++RYA GD DALS+ Q YGDF P TYA+ LN +N+ ++ F +LPV+ R +F +SF+E
Sbjct 62 MKRYANGDVDALSQKQGFYGDFLDFPKTYAEALNHMNEMERQFMALPVETREKFGNSFTE 121
Query 123 FMASMDGPDFWRKLGVVQSAQETPSPGC 150
F+A+ DF+ KLG+ + +P
Sbjct 122 FLAASGEADFFDKLGIKAEEPKEVTPAI 149
> Gokush_Human_gut_27_035_Microviridae_AG0165_putative.VP3
Length=157
Score = 129 bits (325), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 66/148 (45%), Positives = 93/148 (63%), Gaps = 0/148 (0%)
Query 3 KFRTQFDEHPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDINTL 62
+F+TQ+D R GS YA +DE G + L E G ENLY+YIQSY +S DI+ L
Sbjct 2 EFKTQYDARDRIFSDPGSPEHITYAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVL 61
Query 63 LRRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSFSE 122
++RYA GD DALS+ Q YGDF P TYA+ LN +N+ ++ F +LPV+ R +F +SF+E
Sbjct 62 MKRYANGDVDALSQKQGFYGDFLDFPKTYAEALNHMNEMERQFMALPVETREKFGNSFTE 121
Query 123 FMASMDGPDFWRKLGVVQSAQETPSPGC 150
F+A+ DF+ KLG+ + +P
Sbjct 122 FLAASGEADFFDKLGIKAEEPKEVTPAI 149
> Gokush_Human_feces_E_009_Microviridae_AG0284_putative.VP3
Length=148
Score = 122 bits (306), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (63%), Gaps = 1/139 (1%)
Query 11 HPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDINTLLRR-YAQG 69
H R+ G R Y PR D +GV+ L E G+ N+Y+ IQS+KDS DIN L++R A G
Sbjct 2 HERFPSEPGQREVTTYNPRVDSDGVLHLEESGKINIYDQIQSHKDSCDINLLIQRCVATG 61
Query 70 DPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSFSEFMASMDG 129
D LSRVQ AYGDF+ +P TYAD+LN + + +++F+ LP+ R +F+ +F +F+++MD
Sbjct 62 DESILSRVQGAYGDFSDMPHTYADMLNRLREAREFFDGLPLPTRQKFDCNFEQFISAMDK 121
Query 130 PDFWRKLGVVQSAQETPSP 148
P F + P+P
Sbjct 122 PGFLDNFSEPKPVAAEPAP 140
> Gokush_Human_feces_D_014_Microviridae_AG028_putative.VP3
Length=174
Score = 68.2 bits (165), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 0/105 (0%)
Query 32 ENGVMDLVEKGEENLYEYIQSYKDSVDINTLLRRYAQGDPDALSRVQAAYGDFTGLPSTY 91
E G L G EN+YE IQ + I ++RR+ +GDP AL Y D + +P+
Sbjct 52 ETGAKVLKVVGRENIYEKIQECLEPTKIENIIRRFEEGDPTALGHESGIYADISDMPTNI 111
Query 92 ADLLNAVNDGKQYFESLPVDVRAQFNHSFSEFMASMDGPDFWRKL 136
+ + D + F SLP+D++ +F + + FMA + + +KL
Sbjct 112 IEAQKRIQDVQAKFASLPIDIKEKFGNDPTVFMAEILSGEGLQKL 156
> Gokush_Human_feces_B_068_Microviridae_AG0330_putative.VP3
Length=80
Score = 65.9 bits (159), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 27/51 (53%), Positives = 40/51 (78%), Gaps = 0/51 (0%)
Query 87 LPSTYADLLNAVNDGKQYFESLPVDVRAQFNHSFSEFMASMDGPDFWRKLG 137
+P TYA++LN+V G+ F LPV+VRA+FNHSF+E+MA+MD P+F ++
Sbjct 1 MPKTYAEVLNSVIAGENAFMKLPVEVRAEFNHSFAEWMAAMDQPNFVDRMA 51
> Gokush_Human_feces_D_045_Microviridae_AG0400_putative.VP3
Length=109
Score = 65.5 bits (158), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (59%), Gaps = 0/78 (0%)
Query 50 IQSYKDSVDINTLLRRYAQGDPDALSRVQAAYGDFTGLPSTYADLLNAVNDGKQYFESLP 109
I S+ D+N +L R + GD LS QA YGDF+ LP D++N +N +Q F LP
Sbjct 3 IDSFAPYTDLNYMLHRLSVGDTSVLSGRQAIYGDFSALPQNPVDMINVLNSAEQSFSQLP 62
Query 110 VDVRAQFNHSFSEFMASM 127
D +A FN+ + ++A++
Sbjct 63 ADEKAAFNNDYRVWLANL 80
> Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein
Length=157
Score = 61.2 bits (147), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/141 (28%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query 5 RTQFDEHPRYQCCTGSRIKKLYAPRFDENGVMDLVEKGEENLYEYIQSYKDSVDINTLLR 64
R +E R + G + + + +DE G LV+ E + IQSY + I ++
Sbjct 5 RANHNEKERKETEAGRKTRLTFRWTYDEKGNKSLVQDEEIDRDAEIQSYLEETKIENIIN 64
Query 65 RYAQGDPDALSRVQAAYGD-----FTGLPSTYADLLNAVNDGKQYFESLPVDVRAQFNHS 119
R A DP + ++ A D FT +PST A+ N + +Q ++ LP +V+ +F++
Sbjct 65 RAAY-DPSIVQKLGAQLSDAEPQDFTNMPSTLAEAQNLMIQAEQTWDKLPREVKQKFDND 123
Query 120 FSEFMASMDGPDFWRKLGVVQ 140
+F+A D+ LG+ Q
Sbjct 124 VDKFIARFGTADWMEALGLNQ 144
Lambda K H a alpha
0.317 0.134 0.398 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 11179100