bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-28_CDS_annotation_glimmer3.pl_2_2

Length=47
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1       19.2    2.4
  Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1       18.9    3.8


> Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1
Length=614

 Score = 19.2 bits (38),  Expect = 2.4, Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 0/32 (0%)

Query  13  YGCLKERDDMLSFLQEWDFEVAPSVFIELQEV  44
           Y  L+E  D  +      ++ APSV  ++Q+V
Sbjct  66  YTRLREYFDFYAVPLRLLWKSAPSVLTQMQDV  97


> Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1
Length=607

 Score = 18.9 bits (37),  Expect = 3.8, Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 0/32 (0%)

Query  13  YGCLKERDDMLSFLQEWDFEVAPSVFIELQEV  44
           Y  L+E  D  +      ++ APSV  ++Q++
Sbjct  60  YTRLREYFDFYAVPLRLLWKSAPSVLTQMQDI  91



Lambda      K        H        a         alpha
   0.329    0.147    0.464    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3670407