bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-29_CDS_annotation_glimmer3.pl_2_4

Length=46
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Human_feces_A_013_Microviridae_AG011_putative.VP4            18.9    3.6


> Gokush_Human_feces_A_013_Microviridae_AG011_putative.VP4
Length=330

 Score = 18.9 bits (37),  Expect = 3.6, Method: Composition-based stats.
 Identities = 5/12 (42%), Positives = 10/12 (83%), Gaps = 0/12 (0%)

Query  12   PYRTMRKAHEVF  23
            PY+T+R+  E++
Sbjct  154  PYKTVREGGELY  165



Lambda      K        H        a         alpha
   0.321    0.133    0.389    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3685932