bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_3

Length=49
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  unnamed protein product                                             19.2    2.8
  Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.p...  18.5    5.5  
  Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p...  18.1    7.4  
  Alpavirinae_Human_feces_C_029_Microviridae_AG0112_hypothetical....  17.7    9.4  


> unnamed protein product
Length=130

 Score = 19.2 bits (38),  Expect = 2.8, Method: Compositional matrix adjust.
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 4/37 (11%)

Query  10  KQGSAPVVYVASDNNLMATVNQALKESEGAPVLVSSA  46
           K G+   +Y  +    +  V + ++ES  APV+++S 
Sbjct  27  KDGTEEFLYCPN----LIDVLEIIRESVNAPVIINSG  59


> Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.protein
Length=79

 Score = 18.5 bits (36),  Expect = 5.5, Method: Compositional matrix adjust.
 Identities = 13/45 (29%), Positives = 23/45 (51%), Gaps = 4/45 (9%)

Query  7   SYQKQGSAPVVYVASDNNLMATVNQALKE----SEGAPVLVSSAK  47
            ++ + +A +    +D NL++ +  ALKE    +E  P LV   K
Sbjct  32  KFKSRKAAEMRINKTDWNLVSALFYALKEADKWAEENPELVKQNK  76


> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69

 Score = 18.1 bits (35),  Expect = 7.4, Method: Compositional matrix adjust.
 Identities = 6/10 (60%), Positives = 9/10 (90%), Gaps = 0/10 (0%)

Query  21  SDNNLMATVN  30
           SD++L+ATV 
Sbjct  5   SDDDLLATVR  14


> Alpavirinae_Human_feces_C_029_Microviridae_AG0112_hypothetical.protein
Length=75

 Score = 17.7 bits (34),  Expect = 9.4, Method: Compositional matrix adjust.
 Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 0/31 (0%)

Query  7   SYQKQGSAPVVYVASDNNLMATVNQALKESE  37
            ++ + +A +    +D NL+A +  ALKE++
Sbjct  33  KFKSRKAAEMRINKTDWNLVAAMVYALKEAD  63



Lambda      K        H        a         alpha
   0.308    0.121    0.308    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3639357