bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-2_CDS_annotation_glimmer3.pl_2_7
Length=171
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 77.8 8e-20
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 59.7 1e-13
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 44.7 9e-09
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 40.4 2e-06
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 33.9 8e-05
Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1 23.5 1.2
Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1 21.9 3.6
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 77.8 bits (190), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query 40 DPVEQFRFETETFGESVSYRLRSDVSMLLHAADLAKRAGVSTVQRFLDSK-SPRSSSLQE 98
D EQ R E + S R SD+ ++LH DLA RAGV +F SK SP S +Q+
Sbjct 44 DSTEQLRVEIDDTDASRPVRYTSDIRLILHNKDLASRAGVDVASKFGQSKQSP--SQIQQ 101
Query 99 QLDKLNPSDDELLSMVKSRHLQHPSEILAWIDSINELAEDMRSEALKQTAENESTK 154
+D + SD++LL+ V+SR++Q PSEILAW ++ AE++ S+A ++ E E+ K
Sbjct 102 IMDTM--SDEDLLATVRSRYIQSPSEILAWSKELSAYAENLESQA-QELIEAENAK 154
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 59.7 bits (143), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/133 (31%), Positives = 66/133 (50%), Gaps = 9/133 (7%)
Query 35 ISLEVDPVEQFRFETETFGESVSYRLRSDVSMLLHAADLAKRAGVSTVQRFLDSKSPRSS 94
I +V PVE R+ + G R SDV++L++A L + G + + P+ S
Sbjct 26 IYCQVGPVEMLRYVKDDDG---VIRYVSDVNLLMNAERLRNQIGEESYLNLIRGIQPKKS 82
Query 95 SLQEQLDKLNPSDDELLSMVKSRHLQHPSEILAWIDSINELAEDMRSEALKQTAENESTK 154
+ +D++L + +KSR +Q PSE+LAWI+S+ + +RSE L E+ T
Sbjct 83 PYDNKY-----TDEQLFTAIKSRFIQTPSEVLAWIESLGSAGDSIRSE-LDALTESVQTN 136
Query 155 FDSSGSDVSGAES 167
S + SG S
Sbjct 137 QQSEATGDSGKAS 149
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 44.7 bits (104), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 20/38 (53%), Positives = 29/38 (76%), Gaps = 0/38 (0%)
Query 106 SDDELLSMVKSRHLQHPSEILAWIDSINELAEDMRSEA 143
SDD+LL+ V+SRH+Q PSEI+AW ++ AE + S+A
Sbjct 5 SDDDLLATVRSRHIQAPSEIIAWSKELSAYAEHLESQA 42
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 40.4 bits (93), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query 14 GFREFTPTREIS--------TFPSTRIGEISL-EVDPVEQFRFETETFGESVSYRLRSDV 64
GF +++ R+IS S + + L E +PV F F+ G SV++ SD
Sbjct 49 GFAKYSLNRDISDHSQSCRCVMTSEMLAQGILPEPNPVGDFLFDHNADG-SVTFC--SDY 105
Query 65 SMLLHAADLAKRAGVSTVQRFLDSKSPRSSSLQEQLDKLNPSDDELLSMVKSRHLQHPSE 124
+L + V ++R+++S PRSS+ N +DD LL K R++Q +E
Sbjct 106 GILFGQKAIDNMNQVQ-LRRYMNSLVPRSSNYTR-----NYNDDFLLDYCKDRNIQSATE 159
Query 125 ILAWIDSI 132
+ +W+D +
Sbjct 160 MASWLDHL 167
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 33.9 bits (76), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 13/29 (45%), Positives = 24/29 (83%), Gaps = 0/29 (0%)
Query 114 VKSRHLQHPSEILAWIDSINELAEDMRSE 142
+KSR+LQ PSE+ AW++++ + A+ +RS+
Sbjct 4 IKSRYLQSPSEVRAWLETLVDKADVVRSD 32
> Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1
Length=637
Score = 23.5 bits (49), Expect = 1.2, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (49%), Gaps = 10/43 (23%)
Query 1 MIMKEKKELCFGCGFREFTPTREISTFPSTRIGEISLEVDPVE 43
M+M EL G TPT S RIG++S +DPV+
Sbjct 568 MVMNRNYELQINGGP---TPT-------SIRIGDLSTYIDPVK 600
> Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1
Length=780
Score = 21.9 bits (45), Expect = 3.6, Method: Composition-based stats.
Identities = 9/24 (38%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
Query 87 DSKSPRSSSLQEQLDKLNPSDDEL 110
DS P+ + +E+LD NP D +
Sbjct 644 DSILPKWLTYRERLDSFNPEFDHI 667
Lambda K H a alpha
0.312 0.127 0.347 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 12011328