bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-34_CDS_annotation_glimmer3.pl_2_1
Length=184
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_21_005_Microviridae_AG013_putative.VP4 299 6e-102
Alpavirinae_Human_feces_C_010_Microviridae_AG0198_putative.VP4 298 2e-101
Alpavirinae_Human_feces_B_007_Microviridae_AG067_putative.VP4 104 5e-28
Pichovirinae_59_Coral_002_Microviridae_AG0338_putative.VP4 66.2 2e-15
Gokush_Human_gut_33_018_Microviridae_AG0169_putative.VP4 65.5 5e-15
Gokush_gi|19424731|ref|NP_598335.1|_hypothetical_protein_Sp-4p1... 63.5 4e-14
Gokush_Human_feces_C_031_Microviridae_AG0432_putative.VP4 61.2 2e-13
Gokush_Human_gut_37_015_Microviridae_AG031_putative.VP4 60.5 5e-13
Gokush_Human_gut_36_019_Microviridae_AG0277_putative.VP4 60.5 5e-13
Gokush_Human_gut_35_025_Microviridae_AG0357_putative.VP4 60.5 5e-13
> Alpavirinae_Human_gut_21_005_Microviridae_AG013_putative.VP4
Length=451
Score = 299 bits (766), Expect = 6e-102, Method: Compositional matrix adjust.
Identities = 152/158 (96%), Positives = 155/158 (98%), Gaps = 0/158 (0%)
Query 1 MNNIYCENPKVIWHPHASKLVQKYRTFTMPSGTYHGSVLhvnknhvnknnIDKYTIVNPV 60
MNNIYCE+PKVIWHPHASKL+QKYRTFTMPSG YHGSVLHVNKNHVNKNNIDKYTIVNP
Sbjct 1 MNNIYCEDPKVIWHPHASKLIQKYRTFTMPSGVYHGSVLHVNKNHVNKNNIDKYTIVNPA 60
Query 61 TGETFPMFLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVF 120
TGETFPMFLIVPC+KC LCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVF
Sbjct 61 TGETFPMFLIVPCNKCVLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVF 120
Query 121 PEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKR 158
PEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKR
Sbjct 121 PEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKR 158
> Alpavirinae_Human_feces_C_010_Microviridae_AG0198_putative.VP4
Length=451
Score = 298 bits (763), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 150/158 (95%), Positives = 155/158 (98%), Gaps = 0/158 (0%)
Query 1 MNNIYCENPKVIWHPHASKLVQKYRTFTMPSGTYHGSVLhvnknhvnknnIDKYTIVNPV 60
MNNIYCE+PKVIWHPHASKL+QKYRTFTMPSG Y+GSVLHVNKNHVNKNNIDKYT+VNP
Sbjct 1 MNNIYCEDPKVIWHPHASKLIQKYRTFTMPSGVYYGSVLHVNKNHVNKNNIDKYTVVNPA 60
Query 61 TGETFPMFLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVF 120
TGETFPMFLIVPC+KC LCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVF
Sbjct 61 TGETFPMFLIVPCNKCALCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVF 120
Query 121 PEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKR 158
PEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKR
Sbjct 121 PEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKR 158
> Alpavirinae_Human_feces_B_007_Microviridae_AG067_putative.VP4
Length=515
Score = 104 bits (260), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 72/108 (67%), Gaps = 5/108 (5%)
Query 56 IVNPVTGETFPMFLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLP 115
++N TG+ P++++VPC C +C ++KA + RA+ E+ T+ FITLTYN EHLP
Sbjct 64 LLNSETGDMIPLYIVVPCGSCVICRKRKANALATRAIMETETTGSAPLFITLTYNPEHLP 123
Query 116 KNGVFPE-----EIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKR 158
KN E ++QLFFKRLR+ LD + ISH+LRY+A EYG +KR
Sbjct 124 KNEYGYETLRKSDLQLFFKRLRSLLDNQSISHSLRYLACGEYGTNTKR 171
> Pichovirinae_59_Coral_002_Microviridae_AG0338_putative.VP4
Length=274
Score = 66.2 bits (160), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (59%), Gaps = 8/90 (9%)
Query 67 MFLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNG---VFPEE 123
+ + VPC KC C +++A QWSFR E+ TS+ A FITLTY N + +NG + +
Sbjct 21 LMVSVPCGKCLACTKRRASQWSFRLNEEAKTSS-SACFITLTYENAPVSENGFRTLNKRD 79
Query 124 IQLFFKRLRTKLDRRGISHNLRYIAVSEYG 153
QLF KRLR K ++ L+Y A EYG
Sbjct 80 FQLFLKRLRKKCP----TNKLKYYACGEYG 105
> Gokush_Human_gut_33_018_Microviridae_AG0169_putative.VP4
Length=276
Score = 65.5 bits (158), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (58%), Gaps = 13/102 (13%)
Query 53 KYTIVNPVTGETFPMFLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNE 112
KY +P GE +PC +C C ++ + RA ES ++ YF+TLTYNNE
Sbjct 27 KYADADPELGE-----FQIPCGQCIGCRLDRSLDSAVRAHHESLLYDRN-YFLTLTYNNE 80
Query 113 HLPKNG-VFPEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYG 153
+LP G + P ++ LF+KR+R +RG+ NLRY+A EYG
Sbjct 81 NLPPFGSLIPRDLTLFWKRIR----KRGV--NLRYMACGEYG 116
> Gokush_gi|19424731|ref|NP_598335.1|_hypothetical_protein_Sp-4p1_[Spiroplasma_phage_4]
Length=320
Score = 63.5 bits (153), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/88 (40%), Positives = 49/88 (56%), Gaps = 6/88 (7%)
Query 71 VPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGV-----FPEEIQ 125
VPC KC C + +W RA E ++ K +F+TLTY++EHL N + PE I
Sbjct 43 VPCRKCVGCRLDNSAEWGVRASLEIKSNPKHNWFVTLTYSDEHLVYNALGRPNCVPEHIT 102
Query 126 LFFKRLRTKLDRRGISHNLRYIAVSEYG 153
F K LR +RRG ++Y+A +EYG
Sbjct 103 KFIKSLRKYFERRG-HIGIKYLASNEYG 129
> Gokush_Human_feces_C_031_Microviridae_AG0432_putative.VP4
Length=305
Score = 61.2 bits (147), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (4%)
Query 71 VPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFP-EEIQLFFK 129
+PC +C C K+++W+ R + E+ S+K F+TLTY++ HLP++G E QLF K
Sbjct 40 IPCGQCIGCRLSKSREWAARCVVEA-KSHKNNMFLTLTYDDAHLPEDGSLHYEHFQLFMK 98
Query 130 RLRTKLDRRGISHNLRYIAVSEYG 153
R+R R LR+ EYG
Sbjct 99 RMRKYFMSR-FGQQLRFFMCGEYG 121
> Gokush_Human_gut_37_015_Microviridae_AG031_putative.VP4
Length=315
Score = 60.5 bits (145), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/96 (41%), Positives = 56/96 (58%), Gaps = 15/96 (16%)
Query 71 VPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNG-VFPEEIQLFFK 129
+PC +C C ++ + RA ES ++ YF+TLTY+ EHLP G + P ++ LF+K
Sbjct 40 IPCGQCIGCRLDRSLDSAVRAHHESLLYDRN-YFLTLTYSPEHLPPFGSLIPRDLTLFWK 98
Query 130 RLRTKLDRRGISHNLRYIAVSEYGHWSKRRVHSFGR 165
RLR +RG+S LRY+A EYG +FGR
Sbjct 99 RLR----KRGVS--LRYMACGEYG-------STFGR 121
> Gokush_Human_gut_36_019_Microviridae_AG0277_putative.VP4
Length=315
Score = 60.5 bits (145), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/96 (41%), Positives = 56/96 (58%), Gaps = 15/96 (16%)
Query 71 VPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNG-VFPEEIQLFFK 129
+PC +C C ++ + RA ES ++ YF+TLTY+ EHLP G + P ++ LF+K
Sbjct 40 IPCGQCIGCRLDRSLDSAVRAHHESLLYDRN-YFLTLTYSPEHLPPFGSLIPRDLTLFWK 98
Query 130 RLRTKLDRRGISHNLRYIAVSEYGHWSKRRVHSFGR 165
RLR +RG+S LRY+A EYG +FGR
Sbjct 99 RLR----KRGVS--LRYMACGEYG-------STFGR 121
> Gokush_Human_gut_35_025_Microviridae_AG0357_putative.VP4
Length=315
Score = 60.5 bits (145), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/96 (41%), Positives = 56/96 (58%), Gaps = 15/96 (16%)
Query 71 VPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNG-VFPEEIQLFFK 129
+PC +C C ++ + RA ES ++ YF+TLTY+ EHLP G + P ++ LF+K
Sbjct 40 IPCGQCIGCRLDRSLDSAVRAHHESLLYDRN-YFLTLTYSPEHLPPFGSLIPRDLTLFWK 98
Query 130 RLRTKLDRRGISHNLRYIAVSEYGHWSKRRVHSFGR 165
RLR +RG+S LRY+A EYG +FGR
Sbjct 99 RLR----KRGVS--LRYMACGEYG-------STFGR 121
Lambda K H a alpha
0.325 0.138 0.451 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 13457136