bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters



Query= Contig-35_CDS_annotation_glimmer3.pl_2_1

Length=49
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_JCVI_001_Microviridae_AG021_putative.VP4                     20.0    1.7
  Alpavirinae_Human_feces_B_020_Microviridae_AG0348_hypothetical....  18.9    4.0  
  Gokush_Human_feces_A_019_Microviridae_AG0436_putative.VP4           18.9    4.7
  Gokush_Human_feces_E_017_Microviridae_AG0124_putative.VP4           18.1    8.4


> Gokush_JCVI_001_Microviridae_AG021_putative.VP4
Length=297

 Score = 20.0 bits (40),  Expect = 1.7, Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (57%), Gaps = 5/23 (22%)

Query  5   HSSYIYSNHCYNYDLMCTIVYNE  27
           H + +Y N+C+      T+ YN+
Sbjct  53  HEASLYENNCF-----VTLTYND  70


> Alpavirinae_Human_feces_B_020_Microviridae_AG0348_hypothetical.protein
Length=81

 Score = 18.9 bits (37),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 7/17 (41%), Positives = 10/17 (59%), Gaps = 0/17 (0%)

Query  16  NYDLMCTIVYNEYEYSK  32
           N+DL+  +VY   E  K
Sbjct  47  NWDLVSALVYALKEADK  63


> Gokush_Human_feces_A_019_Microviridae_AG0436_putative.VP4
Length=338

 Score = 18.9 bits (37),  Expect = 4.7, Method: Composition-based stats.
 Identities = 7/18 (39%), Positives = 12/18 (67%), Gaps = 0/18 (0%)

Query  32   KKQQQCNATDGTNNNVKR  49
            K+Q+Q  A D T N +++
Sbjct  295  KRQRQQKAMDSTKNKMEQ  312


> Gokush_Human_feces_E_017_Microviridae_AG0124_putative.VP4
Length=338

 Score = 18.1 bits (35),  Expect = 8.4, Method: Composition-based stats.
 Identities = 6/18 (33%), Positives = 12/18 (67%), Gaps = 0/18 (0%)

Query  32   KKQQQCNATDGTNNNVKR  49
            K+Q+Q  + D T N +++
Sbjct  295  KRQRQQKSMDSTKNKMEK  312



Lambda      K        H        a         alpha
   0.315    0.128    0.400    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3639357