bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-36_CDS_annotation_glimmer3.pl_2_2
Length=358
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2 29.3 0.041
Alpavirinae_Human_feces_C_029_Microviridae_AG0111_putative.VP2 28.5 0.074
Gokush_Bourget_052_Microviridae_AG0191_putative.VP2 25.0 0.95
Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1 24.3 2.1
Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH 23.9 2.5
Gokush_Human_feces_C_014_Microviridae_AG0150_putative.VP2 23.5 2.7
Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1 23.1 4.2
> Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2
Length=325
Score = 29.3 bits (64), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/91 (30%), Positives = 47/91 (52%), Gaps = 7/91 (8%)
Query 124 AHGANAGKADSPAEQWA-MRANQIELGLNLANLKKQGEVLDSQAEQNRASASKT----TE 178
A+GA P ++ M+ Q LGL LA++ Q E+ S AE+N+ A K T+
Sbjct 56 ANGAQGQGVTQPTDRSVEMKLKQQGLGLQLASIASQVELNKSLAEKNKVEADKIAGADTK 115
Query 179 EAQTEREMREGKVKEIFQRGKSQYIDNVRKM 209
A+ + EM E + + F + ++ D++ K+
Sbjct 116 VAEKQAEMLESQSE--FNKRITKLQDSIEKL 144
> Alpavirinae_Human_feces_C_029_Microviridae_AG0111_putative.VP2
Length=329
Score = 28.5 bits (62), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (55%), Gaps = 1/55 (2%)
Query 124 AHGANAGKADSPAEQWA-MRANQIELGLNLANLKKQGEVLDSQAEQNRASASKTT 177
A+GA P ++ M Q LGL LA++ Q ++ SQAE+N+A A K +
Sbjct 72 ANGAQGQGVTQPTDRSVEMGLKQQGLGLQLASIASQVDLNKSQAEKNKAEAEKIS 126
> Gokush_Bourget_052_Microviridae_AG0191_putative.VP2
Length=253
Score = 25.0 bits (53), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 0/65 (0%)
Query 130 GKADSPAEQWAMRANQIELGLNLANLKKQGEVLDSQAEQNRASASKTTEEAQTEREMREG 189
G A SP A+ N + +QG SQ N ASAS+ A RE
Sbjct 82 GGASSPGGAQAVMGNPGAAATSSYQQYQQGSTAPSQIGANEASASQAVANADLARETARK 141
Query 190 KVKEI 194
++E+
Sbjct 142 TIQEV 146
> Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1
Length=679
Score = 24.3 bits (51), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query 162 LDSQAEQNRASASKTTEEAQTEREMREGKVKEIFQRGKSQYIDNVRKMFEDMAIEDNDRW 221
LD Q+R + + + + GK Q QY+ NV K + + A+ +N+ W
Sbjct 567 LDGIGFQDRLYRHLNSSCVREDLNISIGK-----QPAWVQYMTNVNKTYGNFALVENEGW 621
Score = 22.3 bits (46), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 8/45 (18%)
Query 185 EMREGKVKEIFQRGKSQYIDN---VRKMFEDMAIEDNDRWGVEVY 226
+MRE I GK QY+ N + K++E+ AI+ +D Y
Sbjct 349 DMRE----NILSAGKQQYVSNDEFITKLYEN-AIDIHDTSNTPTY 388
> Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH
Length=352
Score = 23.9 bits (50), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 148 LGLNLANLKKQGEVLDSQAEQNRASASKTT 177
LGL LA++ Q + SQA +N A A K +
Sbjct 117 LGLQLASMASQVALNQSQANKNNAEAKKIS 146
> Gokush_Human_feces_C_014_Microviridae_AG0150_putative.VP2
Length=286
Score = 23.5 bits (49), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/42 (36%), Positives = 21/42 (50%), Gaps = 2/42 (5%)
Query 44 LENQIKLNEAANESNYRWGEKAAENAFKRQM--EAYERSYKD 83
L N A+ Y E AAE AF+++M AY+ + KD
Sbjct 90 LSNLANAGSQASAKKYNSAEAAAERAFQKEMRGTAYQDTVKD 131
> Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1
Length=607
Score = 23.1 bits (48), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 22/75 (29%)
Query 140 AMRANQIELG----LNLANLKKQGEVLDSQAEQNRASASKTTEEAQTEREMREGKVKEIF 195
A AN + +G ++LA+LK Q VL A + E Q + KEI
Sbjct 320 ASSANTLPVGSTLRVDLASLKSQFTVL----------ALRQAEALQ--------RWKEIS 361
Query 196 QRGKSQYIDNVRKMF 210
Q G S Y + +RK F
Sbjct 362 QSGDSDYREQIRKHF 376
Lambda K H a alpha
0.309 0.123 0.333 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 31144374