bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-37_CDS_annotation_glimmer3.pl_2_4

Length=64
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_D_031_Microviridae_AG0420_hypothetical....  77.8    4e-22
  Alpavirinae_Human_feces_D_008_Microviridae_AG097_hypothetical.p...  77.8    4e-22
  Gokush_Human_gut_33_003_Microviridae_AG064_putative.peptidase.M...  20.4    2.0  
  Gokush_SectLung2LLL_002_Microviridae_AG0240_putative.VP1            19.2    4.8


> Alpavirinae_Human_feces_D_031_Microviridae_AG0420_hypothetical.protein
Length=64

 Score = 77.8 bits (190),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 56/64 (88%), Gaps = 0/64 (0%)

Query  1   MLFKVLKHAKNNDPQRpvepvvyvveeaeLLHFLHENLKPSSGNVLVFDSFPEENLYLLS  60
           MLFKVLKH K  DPQ P++P VYVVEEAELLHFLHEN +P+S +VL+FD FPEENLYLLS
Sbjct  1   MLFKVLKHPKTQDPQHPMDPEVYVVEEAELLHFLHENARPNSNSVLLFDVFPEENLYLLS  60

Query  61  NDKD  64
           NDKD
Sbjct  61  NDKD  64


> Alpavirinae_Human_feces_D_008_Microviridae_AG097_hypothetical.protein
Length=64

 Score = 77.8 bits (190),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 49/64 (77%), Positives = 56/64 (88%), Gaps = 0/64 (0%)

Query  1   MLFKVLKHAKNNDPQRpvepvvyvveeaeLLHFLHENLKPSSGNVLVFDSFPEENLYLLS  60
           MLFKVLKH K  DPQ P++P +YVVEEAELLHFLHEN +P+S +VL+FD FPEENLYLLS
Sbjct  1   MLFKVLKHPKTQDPQHPMDPEIYVVEEAELLHFLHENARPNSNSVLLFDVFPEENLYLLS  60

Query  61  NDKD  64
           NDKD
Sbjct  61  NDKD  64


> Gokush_Human_gut_33_003_Microviridae_AG064_putative.peptidase.M15_3
Length=130

 Score = 20.4 bits (41),  Expect = 2.0, Method: Compositional matrix adjust.
 Identities = 5/15 (33%), Positives = 13/15 (87%), Gaps = 0/15 (0%)

Query  37   NLKPSSGNVLVFDSF  51
            ++ P+SG ++V+D++
Sbjct  102  SIVPNSGGIIVYDNW  116


> Gokush_SectLung2LLL_002_Microviridae_AG0240_putative.VP1
Length=540

 Score = 19.2 bits (38),  Expect = 4.8, Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (58%), Gaps = 1/33 (3%)

Query  33   FLHENLKPSSGNVLVFDSFPEENLY-LLSNDKD  64
             +H NL   + N++  + F +ENL   L+ DKD
Sbjct  144  LVHNNLHLRAYNLIWNEWFRDENLQDSLTVDKD  176



Lambda      K        H        a         alpha
   0.318    0.138    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3692164