bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-38_CDS_annotation_glimmer3.pl_2_3
Length=67
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.... 27.3 0.002
Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.... 25.8 0.009
Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.... 25.8 0.011
Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.... 25.4 0.016
Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.p... 23.5 0.11
Gokush_Bourget_224_Microviridae_AG0245_putative.VP1 23.5 0.19
Gokush_Bourget_164_Microviridae_AG044_putative.VP1 22.7 0.28
Gokush_Bourget_154_Microviridae_AG0430_putative.VP1 22.7 0.36
Gokush_Bourget_052_Microviridae_AG0193_putative.VP1 21.6 0.76
Gokush_Bourget_309_Microviridae_AG0288_putative.VP1 21.6 0.76
> Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.protein
Length=66
Score = 27.3 bits (59), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (38%), Positives = 31/56 (55%), Gaps = 2/56 (4%)
Query 1 MAATNYTIVRKNKENNTILLDELTNKWTYKQALAIAKE-SKTNTSELVCVIESNKI 55
MAAT +T + + N I+ E+ TYK A AK + ++LVCV+ES K+
Sbjct 1 MAATKFTAIYADN-NGKIIEREIPGMNTYKIAEKFAKMLNDPEETKLVCVVESWKL 55
> Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.protein
Length=55
Score = 25.8 bits (55), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (58%), Gaps = 2/38 (5%)
Query 20 LDELTNKWTYKQALAIAKE--SKTNTSELVCVIESNKI 55
+ EL K TYK A+ +AK + E+V V+ES K+
Sbjct 1 MKELPGKHTYKVAVTVAKALMQEVEGEEIVAVVESWKL 38
> Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.protein
Length=66
Score = 25.8 bits (55), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (51%), Gaps = 4/57 (7%)
Query 1 MAATNYTIVRKNKENNTILLDELTNKWTYKQA--LAIAKESKTNTSELVCVIESNKI 55
MAAT +T + N E I+ E+ TYK A AI T LVCVIES K+
Sbjct 1 MAATKFTAIYVNNEGK-IIEREIPGMNTYKIAEKFAIMLNDPEETK-LVCVIESWKL 55
> Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.protein
Length=73
Score = 25.4 bits (54), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (51%), Gaps = 12/61 (20%)
Query 1 MAATNYTIVRKNKENNTILLDELTNKWTYKQALAIA------KESKTNTSELVCVIESNK 54
MAAT +T + N E I+ E+ TYK A A KE+K LVCV+ES K
Sbjct 1 MAATKFTAIYVNNEGK-IIEREIPGMNTYKIAEKFAMMLNDPKETK-----LVCVVESWK 54
Query 55 I 55
+
Sbjct 55 L 55
> Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.protein
Length=73
Score = 23.5 bits (49), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/56 (36%), Positives = 30/56 (54%), Gaps = 2/56 (4%)
Query 1 MAATNYTIVRKNKENNTILLDELTNKWTYKQALAIAKE-SKTNTSELVCVIESNKI 55
MAAT +T + N E I+ E+ +YK A A + ++LVCVIE+ K+
Sbjct 1 MAATKFTAIYINNEGK-IIKREIPGMNSYKIAEKFAMMLNDPEETKLVCVIETWKM 55
> Gokush_Bourget_224_Microviridae_AG0245_putative.VP1
Length=536
Score = 23.5 bits (49), Expect = 0.19, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 13/15 (87%), Gaps = 0/15 (0%)
Query 2 AATNYTIVRKNKENN 16
A+TNYTI+R+ K ++
Sbjct 183 ASTNYTILRRGKRHD 197
> Gokush_Bourget_164_Microviridae_AG044_putative.VP1
Length=540
Score = 22.7 bits (47), Expect = 0.28, Method: Composition-based stats.
Identities = 8/14 (57%), Positives = 12/14 (86%), Gaps = 0/14 (0%)
Query 3 ATNYTIVRKNKENN 16
ATNYTI+R+ K ++
Sbjct 184 ATNYTILRRGKRHD 197
> Gokush_Bourget_154_Microviridae_AG0430_putative.VP1
Length=540
Score = 22.7 bits (47), Expect = 0.36, Method: Composition-based stats.
Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 0/15 (0%)
Query 2 AATNYTIVRKNKENN 16
AATNY I+R+ K ++
Sbjct 183 AATNYAILRRGKRHD 197
> Gokush_Bourget_052_Microviridae_AG0193_putative.VP1
Length=528
Score = 21.6 bits (44), Expect = 0.76, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 12/14 (86%), Gaps = 0/14 (0%)
Query 3 ATNYTIVRKNKENN 16
+TNYTI+R+ K ++
Sbjct 184 STNYTILRRGKRHD 197
> Gokush_Bourget_309_Microviridae_AG0288_putative.VP1
Length=536
Score = 21.6 bits (44), Expect = 0.76, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 12/14 (86%), Gaps = 0/14 (0%)
Query 3 ATNYTIVRKNKENN 16
+TNYTI+R+ K ++
Sbjct 184 STNYTILRRGKRHD 197
Lambda K H a alpha
0.310 0.122 0.325 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3642139