bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-3_CDS_annotation_glimmer3.pl_2_3

Length=57
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Bourget_052_Microviridae_AG0194_putative.nonstructural.p...  21.2    0.72 
  Alpavirinae_Human_gut_33_005_Microviridae_AG0184_putative.VP1       18.9    5.0
  Alpavirinae_Human_feces_D_008_Microviridae_AG098_putative.VP1       18.9    5.0
  Alpavirinae_Human_feces_B_039_Microviridae_AG096_putative.VP1       18.5    7.1
  Alpavirinae_Human_feces_D_031_Microviridae_AG0425_putative.VP1      18.5    8.8
  Alpavirinae_Human_feces_A_033_Microviridae_AG0381_putative.VP4      18.5    9.3


> Gokush_Bourget_052_Microviridae_AG0194_putative.nonstructural.protein
Length=85

 Score = 21.2 bits (43),  Expect = 0.72, Method: Compositional matrix adjust.
 Identities = 9/24 (38%), Positives = 17/24 (71%), Gaps = 0/24 (0%)

Query  7   LVSVKPKNSQSQGQIFVVRRKDIS  30
           +VSV+ + SQ+  + FVV  ++I+
Sbjct  5   IVSVQDRASQTYARPFVVPHRNIA  28


> Alpavirinae_Human_gut_33_005_Microviridae_AG0184_putative.VP1
Length=618

 Score = 18.9 bits (37),  Expect = 5.0, Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 11/17 (65%), Gaps = 0/17 (0%)

Query  28   DISSFVETKLSSDNILL  44
            DIS+   T LSSD  ++
Sbjct  413  DISAVENTNLSSDEAII  429


> Alpavirinae_Human_feces_D_008_Microviridae_AG098_putative.VP1
Length=618

 Score = 18.9 bits (37),  Expect = 5.0, Method: Composition-based stats.
 Identities = 7/15 (47%), Positives = 10/15 (67%), Gaps = 0/15 (0%)

Query  28   DISSFVETKLSSDNI  42
            D+S  V T ++ DNI
Sbjct  409  DLSEVVNTNITGDNI  423


> Alpavirinae_Human_feces_B_039_Microviridae_AG096_putative.VP1
Length=579

 Score = 18.5 bits (36),  Expect = 7.1, Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query  8    VSVKPK-NSQSQGQIFVVRRKDISSFVETKLSSDNILLIDSIDT  50
            V+V P   S +    F++ + ++SS      +++N L+  S +T
Sbjct  268  VAVLPSLTSAAVSPTFIINKNNVSSSYTIVNNNNNTLVASSTNT  311


> Alpavirinae_Human_feces_D_031_Microviridae_AG0425_putative.VP1
Length=614

 Score = 18.5 bits (36),  Expect = 8.8, Method: Composition-based stats.
 Identities = 6/15 (40%), Positives = 10/15 (67%), Gaps = 0/15 (0%)

Query  28   DISSFVETKLSSDNI  42
            D+S  V T ++ DN+
Sbjct  405  DLSEVVNTNITGDNV  419


> Alpavirinae_Human_feces_A_033_Microviridae_AG0381_putative.VP4
Length=307

 Score = 18.5 bits (36),  Expect = 9.3, Method: Composition-based stats.
 Identities = 10/28 (36%), Positives = 16/28 (57%), Gaps = 0/28 (0%)

Query  21   IFVVRRKDISSFVETKLSSDNILLIDSI  48
            +FV+   D     + KLSS++ L I +I
Sbjct  127  LFVLEVADGKRAAQRKLSSEHRLHIHAI  154



Lambda      K        H        a         alpha
   0.314    0.129    0.323    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3661448