bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-3_CDS_annotation_glimmer3.pl_2_4

Length=65
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.pr...  33.9    9e-06
  Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.p...  29.3    5e-04
  Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical....  28.5    8e-04
  Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p...  25.8    0.009
  Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical....  25.0    0.020
  Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical....  24.6    0.028
  Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1       18.9    9.1


> Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.protein
Length=52

 Score = 33.9 bits (76),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 16/20 (80%), Positives = 18/20 (90%), Gaps = 0/20 (0%)

Query  14  LISTFIIGVITCLFVQSCTA  33
           +I+TFIIGVIT L VQSCTA
Sbjct  1   MIATFIIGVITALTVQSCTA  20


> Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.protein
Length=64

 Score = 29.3 bits (64),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 0/26 (0%)

Query  8   WIEIVKLISTFIIGVITCLFVQSCTA  33
           W EI+++I T +  ++T L  QSCTA
Sbjct  6   WKEIIRIIVTVLTALLTALGAQSCTA  31


> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65

 Score = 28.5 bits (62),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 55/65 (85%), Gaps = 0/65 (0%)

Query  1   MKITPQQWIEIVKLISTFIIGVITCLFVQSCTAsmsiskynsnssqsteqtstssvdstK  60
           MKIT  QW+EI++ IST II +IT L VQSCT S+S+SK NSNS+Q TEQTSTSSVDSTK
Sbjct  1   MKITSNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVSKNNSNSTQKTEQTSTSSVDSTK  60

Query  61  ISINR  65
           I+INR
Sbjct  61  ININR  65


> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68

 Score = 25.8 bits (55),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 21/32 (66%), Positives = 25/32 (78%), Gaps = 0/32 (0%)

Query  1   MKITPQQWIEIVKLISTFIIGVITCLFVQSCT  32
           MKIT  QW+EI++ IST II +IT L VQSCT
Sbjct  1   MKITGNQWVEIIRAISTAIIAIITTLCVQSCT  32


> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68

 Score = 25.0 bits (53),  Expect = 0.020, Method: Compositional matrix adjust.
 Identities = 21/32 (66%), Positives = 25/32 (78%), Gaps = 0/32 (0%)

Query  1   MKITPQQWIEIVKLISTFIIGVITCLFVQSCT  32
           MKIT  QW+EI++ IST II +IT L VQSCT
Sbjct  1   MKITGTQWVEIIRAISTAIIAIITTLCVQSCT  32


> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67

 Score = 24.6 bits (52),  Expect = 0.028, Method: Compositional matrix adjust.
 Identities = 21/32 (66%), Positives = 25/32 (78%), Gaps = 0/32 (0%)

Query  1   MKITPQQWIEIVKLISTFIIGVITCLFVQSCT  32
           MKIT  QW+EI++ IST II +IT L VQSCT
Sbjct  1   MKITGTQWVEIIRAISTAIIAIITTLCVQSCT  32


> Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1
Length=584

 Score = 18.9 bits (37),  Expect = 9.1, Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 12/20 (60%), Gaps = 0/20 (0%)

Query  3    ITPQQWIEIVKLISTFIIGV  22
            ITP+ W  ++K + T   G+
Sbjct  515  ITPELWSNMLKPLGTKGTGI  534



Lambda      K        H        a         alpha
   0.332    0.140    0.428    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3675489