bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-41_CDS_annotation_glimmer3.pl_2_1
Length=190
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.p... 188 1e-61
Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.p... 188 1e-61
Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.... 39.3 6e-06
Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.... 38.9 8e-06
Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2 25.4 0.30
Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2 25.4 0.30
Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1 22.3 3.2
Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1 21.6 6.3
Gokush_Human_gut_21_019_Microviridae_AG0380_putative.VP1 21.6 6.4
Gokush_Human_gut_31_054_Microviridae_AG0236_putative.VP1 21.2 7.2
> Alpavirinae_Human_gut_32_012_Microviridae_AG0209_hypothetical.protein
Length=190
Score = 188 bits (477), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/177 (75%), Positives = 140/177 (79%), Gaps = 0/177 (0%)
Query 14 WtlvaaivaaltafftvSCQYSGTLFRTGVHNDTVRYEYRVRSRNAIVSCNQLISIPEFI 73
WTLVAAIVAALTAFFT SCQYSGTLFRTGVHNDTVRYEYRVRSRNA+VSCNQLIS PEF
Sbjct 14 WTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYRVRSRNALVSCNQLISTPEFF 73
Query 74 RSTRSFTDFITFATSRPTQTVSLHGHSTTLTPVIPLEFRSACGLLTISNYPTIIGLNLSC 133
R T S DFITF TSRP Q VS HGHS T PVIPL RS GL +NYP I +L+C
Sbjct 74 RFTHSSPDFITFVTSRPAQMVSFHGHSKTPMPVIPLASRSVSGLSITTNYPIFIVSSLNC 133
Query 134 SMSPALQSSARCGKSGKIFLTSLLPIGFVkrsrrggrrgkgrprpgTKTVSLGGSHL 190
S +PAL+S+ G L SLLPIGFVKRSRRGGRRGKGRPRP TKTV+LGGSHL
Sbjct 134 SATPALRSNVLSESFGPTCLASLLPIGFVKRSRRGGRRGKGRPRPTTKTVTLGGSHL 190
> Alpavirinae_Human_gut_31_126_Microviridae_AG0304_hypothetical.protein
Length=190
Score = 188 bits (477), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/177 (75%), Positives = 140/177 (79%), Gaps = 0/177 (0%)
Query 14 WtlvaaivaaltafftvSCQYSGTLFRTGVHNDTVRYEYRVRSRNAIVSCNQLISIPEFI 73
WTLVAAIVAALTAFFT SCQYSGTLFRTGVHNDTVRYEYRVRSRNA+VSCNQLIS PEF
Sbjct 14 WTLVAAIVAALTAFFTASCQYSGTLFRTGVHNDTVRYEYRVRSRNALVSCNQLISTPEFF 73
Query 74 RSTRSFTDFITFATSRPTQTVSLHGHSTTLTPVIPLEFRSACGLLTISNYPTIIGLNLSC 133
R T S DFITF TSRP Q VS HGHS T PVIPL RS GL +NYP I +L+C
Sbjct 74 RFTHSSPDFITFVTSRPAQMVSFHGHSKTPMPVIPLASRSVSGLSITTNYPIFIVSSLNC 133
Query 134 SMSPALQSSARCGKSGKIFLTSLLPIGFVkrsrrggrrgkgrprpgTKTVSLGGSHL 190
S +PAL+S+ G L SLLPIGFVKRSRRGGRRGKGRPRP TKTV+LGGSHL
Sbjct 134 SATPALRSNVLSESFGPTCLASLLPIGFVKRSRRGGRRGKGRPRPTTKTVTLGGSHL 190
> Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.protein
Length=215
Score = 39.3 bits (90), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 31 SCQYSGTLFRTGVHNDTVRYEYRVRSRN 58
SC YS +FR G+H DTVR E ++++R+
Sbjct 53 SCSYSQKVFRNGIHYDTVRIESKIKTRD 80
> Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.protein
Length=192
Score = 38.9 bits (89), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/33 (52%), Positives = 24/33 (73%), Gaps = 2/33 (6%)
Query 31 SCQYSGTLFRTGVHNDTVRYEYRVRSRNAIVSC 63
SC Y+ +FR GVH+DTV+ E ++SRN +SC
Sbjct 30 SCSYTQKVFRHGVHHDTVKVESIIKSRN--LSC 60
> Alpavirinae_Human_gut_32_012_Microviridae_AG0207_putative.VP2
Length=364
Score = 25.4 bits (54), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 0/50 (0%)
Query 31 SCQYSGTLFRTGVHNDTVRYEYRVRSRNAIVSCNQLISIPEFIRSTRSFT 80
Q S T +TG+ E ++R ++ NQ+ I + IRS+R T
Sbjct 258 ESQTSATQAQTGLTQAQTETENQLRKLRKALTQNQINEITQKIRSSRVVT 307
> Alpavirinae_Human_gut_31_126_Microviridae_AG0303_putative.VP2
Length=364
Score = 25.4 bits (54), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 0/50 (0%)
Query 31 SCQYSGTLFRTGVHNDTVRYEYRVRSRNAIVSCNQLISIPEFIRSTRSFT 80
Q S T +TG+ E ++R ++ NQ+ I + IRS+R T
Sbjct 258 ESQTSATQAQTGLTQAQTETENQLRKLRKALTQNQINEITQKIRSSRVVT 307
> Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1
Length=545
Score = 22.3 bits (46), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/45 (29%), Positives = 22/45 (49%), Gaps = 5/45 (11%)
Query 33 QYSGTLFRTGVHNDTVRYEYRVRSRNAIVSCNQLISIPEFIRSTR 77
QY L R G RY +V++ +V ++ + IPE++ R
Sbjct 308 QYYEALARGGS-----RYREQVQALWDVVISDKTMQIPEYLGGGR 347
> Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1
Length=573
Score = 21.6 bits (44), Expect = 6.3, Method: Composition-based stats.
Identities = 14/59 (24%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query 49 RYEYRVRSRNAIVSCNQLISIPEFIRSTRSFTDFITFATSRPTQTVSLHGHSTT-LTPV 106
RY +VR+ + ++ + +PE++ R + Q V G TT TP+
Sbjct 347 RYREQVRALFGVSISDKTVQVPEYLGGGRYHVNV--------NQIVQTSGQQTTNETPI 397
> Gokush_Human_gut_21_019_Microviridae_AG0380_putative.VP1
Length=563
Score = 21.6 bits (44), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 0/51 (0%)
Query 49 RYEYRVRSRNAIVSCNQLISIPEFIRSTRSFTDFITFATSRPTQTVSLHGH 99
RY +RS ++VS + + PEF+ S + A + T + S G+
Sbjct 338 RYTEVLRSFFSVVSPDARLQRPEFLGSFTKMVNVNPIAQTSATDSTSPQGN 388
> Gokush_Human_gut_31_054_Microviridae_AG0236_putative.VP1
Length=563
Score = 21.2 bits (43), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
Query 49 RYEYRVRSRNAIVSCNQLISIPEFIRSTRSFTDFITFATSRPTQTVSLHGH 99
RY +RS +VS + + PEF+ S + A + T + S G+
Sbjct 338 RYTEVLRSFFGVVSPDARLQRPEFLGSFTKMVNVNPIAQTSATDSTSPQGN 388
Lambda K H a alpha
0.322 0.134 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 13940766