bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters



Query= Contig-49_CDS_annotation_glimmer3.pl_2_1

Length=50
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical....  27.3    0.005
  Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical....  26.6    0.007


> Alpavirinae_Human_feces_D_022_Microviridae_AG0390_hypothetical.protein
Length=215

 Score = 27.3 bits (59),  Expect = 0.005, Method: Composition-based stats.
 Identities = 11/11 (100%), Positives = 11/11 (100%), Gaps = 0/11 (0%)

Query  40   VKNIIIGGRHL  50
            VKNIIIGGRHL
Sbjct  205  VKNIIIGGRHL  215


> Alpavirinae_Human_feces_A_033_Microviridae_AG0382_hypothetical.protein
Length=192

 Score = 26.6 bits (57),  Expect = 0.007, Method: Composition-based stats.
 Identities = 10/11 (91%), Positives = 11/11 (100%), Gaps = 0/11 (0%)

Query  40   VKNIIIGGRHL  50
            VKNI+IGGRHL
Sbjct  182  VKNIVIGGRHL  192



Lambda      K        H        a         alpha
   0.332    0.156    0.476    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3623832