bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-5_CDS_annotation_glimmer3.pl_2_3
Length=811
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1 563 0.0
Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1 470 2e-155
Alpavirinae_Human_gut_21_005_Microviridae_AG016_putative.VP1 466 8e-154
Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1 131 6e-34
Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1 130 1e-33
Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1 124 1e-31
Pichovirinae_Pavin_723_Microviridae_AG0327_putative.VP1 120 2e-30
Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1 114 1e-28
Gokush_gi|12085136|ref|NP_073538.1|_major_capsid_protein_[Bdell... 111 2e-27
Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1 108 2e-26
> Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1
Length=780
Score = 563 bits (1451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/842 (41%), Positives = 474/842 (56%), Gaps = 100/842 (12%)
Query 5 AFDATLDVNNEIKVNNFDWSHANNLTTQIGRVTPVFCELVPAHGSVRINPRFGLQFMPMV 64
F+ DV N++K N+FDWSH NN TT +GR+TPVF ELVP + SVRI P FGL+FMPM+
Sbjct 4 VFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSVRIKPEFGLRFMPMM 63
Query 65 FPIQTRLRARMMFFKYPLRALWDGYRDFI-GNFREDLEEPYLDLN--TVTRLDAMAKTGS 121
FPIQT+++A + FFK PLR LW Y DFI + E+ + P++ + + + A++++G
Sbjct 64 FPIQTKMKAYLSFFKVPLRTLWKDYMDFISADNTEEYQPPFIKFSGKSFSEGGALSESG- 122
Query 122 LGDYLGLPTTLFGKFGTTLSVAT-------TGHIFGLKGNQFNGSDQ----MQYISG--V 168
LGDY+G+P + + V T +FG Q + + MQY++G
Sbjct 123 LGDYIGMPVSNIDTNWQVMDVGTLIDSTKGATAVFGSATKQGDLPELRFSVMQYVNGPFT 182
Query 169 PIDSVSNLRAFLSL-------KPL--------SIDTPSQRISWT--VVSPGSASSSETVN 211
P S S+ ++ + P+ +D + RI WT + G+++
Sbjct 183 PQISYSDNSCYMPIGNDYSFFSPIITFYFTKEMMDAGTFRIKWTGSLNIEGTSARQTAEQ 242
Query 212 IVPFVSASGIPGSDSITANSRLEFDIPWKRIGNPTSADLaafssgavagfaKKSTTYILM 271
V F S P I + + P IG P A F T Y +
Sbjct 243 FVNFTKCSKTP---VILTFKKKQTPAPVGDIGLPFDAS---QKVSFFEPFYVSDTIYRVK 296
Query 272 NFIQATFKVVN-GGRFVKLLFSFPESMYGSIPGDYEFFTFLNLYSAFGRRISGDSTAWGL 330
+ATF + N G + +F GSI Y+ F + ++ A G
Sbjct 297 FSFEATFNIANFPGMGINEDDAFSLGFTGSI---YDIFNLGGKLGSTDVNLTFSYNASGD 353
Query 331 QTTSFGRAFSGISDGEQTNSFTIRVSDFDLAGSGAQAHYYLTSDKPVDLTLGSSPYYNSG 390
+ F R SGIS +PYY S
Sbjct 354 SSLVFARPVSGIS----------------------------------------TPYY-SV 372
Query 391 SANKDKQIKISAYSFRAYEGIYNAYIRDNRNNPYYVNGQVQYNKWIPTYDGGADQ-NIYE 449
+K IK+SAY FRAY+ IYNAYIR+ RNNP+ +NG+ YN+WI T +GG D +
Sbjct 373 YNTTEKAIKVSAYPFRAYQAIYNAYIRNTRNNPFILNGKKTYNRWITTDEGGEDSLTPLD 432
Query 450 LRYANWEKDFLTTAVQSPQQGTAPLVGIttytetvettSDDGTPVTRELSRIALVDEDGK 509
L YANW+ D TTA+ +PQQG APLVG+TTY +D G VT A+VDEDG
Sbjct 433 LLYANWQSDAYTTALTAPQQGVAPLVGLTTYESVSL--NDAGHTVTT--VNTAIVDEDGN 488
Query 510 KYQVSFDSDSEGLKGVSYVELDNEVKLRQPRNLIDVVTSGISINDLRNVNAYQKFLELNM 569
Y+V F+S+ E LKGV+Y L + ++L+ VTSGISIND RNVNAYQ++LELN
Sbjct 489 AYKVDFESNGEALKGVNYTPLKAGEAINM-QSLVSPVTSGISINDFRNVNAYQRYLELNQ 547
Query 570 RKGYSYRDIIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDGSQTYAKALG 629
+G+SY++IIEGRF+V VRYD L MPE+ GG +RDI ++ I+QTV+ GS Y +LG
Sbjct 548 FRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETTDTGS--YVGSLG 605
Query 630 SQSGIAGVRGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQPEFN 689
SQ+G+A G+S ++ FCDEESIVMGI+ V P+PVY +LPK TYR LD + PEF+
Sbjct 606 SQAGLATCFGNSDGSISVFCDEESIVMGIMYVMPMPVYDSILPKWLTYRERLDSFNPEFD 665
Query 690 HIGFQPILYKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFLMHR 749
HIG+QPI KE+ +QA+ G D L+ VFGY RPWYEYVQK D+AHGLF ++L NF+M R
Sbjct 666 HIGYQPIYLKELAAIQAFESGKD-LNTVFGYQRPWYEYVQKVDRAHGLFLSSLRNFIMFR 724
Query 750 VFNQKPQLAQSFLVIDPAQVTDVFAVTKADDGTELADKIYGQIWFDCTAKLPISRVAIPR 809
F P+L +SF V+ P V +VF+V TE++DKI GQI FDCTA+LPISRV +PR
Sbjct 725 SFENAPELGKSFTVMQPGSVNNVFSV------TEVSDKILGQIHFDCTAQLPISRVVVPR 778
Query 810 LD 811
L+
Sbjct 779 LE 780
> Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1
Length=731
Score = 470 bits (1209), Expect = 2e-155, Method: Compositional matrix adjust.
Identities = 236/424 (56%), Positives = 298/424 (70%), Gaps = 21/424 (5%)
Query 399 KISAYSFRAYEGIYNAYIRDNRNNPYYVNGQVQYNKWIPTYDGGADQNIYELRYANWEKD 458
++ AY FRAYE +YNAY RD RNNP+ VNG+ YNKW+PT GGAD +YELR NWE+D
Sbjct 318 RLLAYRFRAYESVYNAYYRDIRNNPFVVNGRPVYNKWLPTMKGGADTTLYELRQCNWERD 377
Query 459 FLTTAVQSPQQGT-APLVGIttytetvettSDDGTPVTRELSRIALVDEDGKKYQVSF-- 515
FLTTAV +PQQG APLVG+ S+DGT ++ + LVDEDG KY VS+
Sbjct 378 FLTTAVPNPQQGANAPLVGLVMGDVVTR--SEDGTYSVQK--QTVLVDEDGSKYGVSYKV 433
Query 516 DSDSEGLKGVSYVELDNEVKLRQPRNLIDVVT------SGISINDLRNVNAYQKFLELNM 569
D E L GV Y + + + + ++ SG +I LR VNAYQKFLELNM
Sbjct 434 SEDGERLVGVDYDPVSEKTPVTAIGSYAELAALATEQGSGFTIETLRYVNAYQKFLELNM 493
Query 570 RKGYSYRDIIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDGSQ-TYAKAL 628
RKG+SY+ I++GR+++ +R+DELLMPEF GG SR++ M ++ QTVDQ S+ YA+AL
Sbjct 494 RKGFSYKQIMQGRWDIDIRFDELLMPEFIGGISRELSMRTVEQTVDQQSGSSRGQYAEAL 553
Query 629 GSQSGIAGVRGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQPEF 688
GS++GIAGV G + +E FCDEES ++G+L VTP+P+YTQLLPK FTY GLLDHYQPEF
Sbjct 554 GSKTGIAGVYGSTSNNIEVFCDEESYIIGLLTVTPVPIYTQLLPKDFTYNGLLDHYQPEF 613
Query 689 NHIGFQPILYKEVCPLQAYS-DGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFLM 747
+ IGFQPI YKE+CP+ + D + L+ FGY RPWYEYV KYD AHGLFRTN+ NF+M
Sbjct 614 DRIGFQPITYKEICPMNIVAGDSANQLNKTFGYQRPWYEYVAKYDSAHGLFRTNMKNFIM 673
Query 748 HRVFNQKPQLAQSFLVIDPAQVTDVFAVTKADDGTELADKIYGQIWFDCTAKLPISRVAI 807
RVF+ PQL Q FL++DP V VF+V TE DKI+G + F+ TA+LPISRVAI
Sbjct 674 SRVFSGLPQLGQQFLLVDPDTVNQVFSV------TEYTDKIFGYVKFNATARLPISRVAI 727
Query 808 PRLD 811
PRLD
Sbjct 728 PRLD 731
Score = 196 bits (498), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 93/141 (66%), Positives = 106/141 (75%), Gaps = 6/141 (4%)
Query 1 MANGAFDATLDVNNEIKVNNFDWSHANNLTTQIGRVTPVFCELVPAHGSVRINPRFGLQF 60
MA FDAT D NN I VN+FDWSH NNLTT GR+TPVFCELVPA GS+RINP FGL+
Sbjct 1 MAQNIFDATFDANNRIDVNSFDWSHVNNLTTDFGRITPVFCELVPAKGSLRINPEFGLEL 60
Query 61 MPMVFPIQTRLRARMMFFKYPLRALWDGYRDFIGNFREDLEEPYLDLNTVTRLDAMAKTG 120
MPMVFP+QTR+ AR+ FFK LR++W+ Y DFI NFR+DLEEPY+ L R + M KTG
Sbjct 61 MPMVFPVQTRMFARLNFFKVTLRSMWEDYSDFISNFRDDLEEPYI-LPDSFRFEKMCKTG 119
Query 121 SLGDYLGLPTTLFGKFGTTLS 141
SLGDYLGLPT FGT S
Sbjct 120 SLGDYLGLPT-----FGTKSS 135
> Alpavirinae_Human_gut_21_005_Microviridae_AG016_putative.VP1
Length=742
Score = 466 bits (1199), Expect = 8e-154, Method: Compositional matrix adjust.
Identities = 238/452 (53%), Positives = 306/452 (68%), Gaps = 21/452 (5%)
Query 370 YLTSDKPVDLTLGSSPYYNSGSANKDKQIKISAYSFRAYEGIYNAYIRDNRNNPYYVNGQ 429
+ S + ++T P+ S A ++ AY FRAYE +YNAY RD RNNP+ VNG+
Sbjct 302 FFESPEESEITFDDFPF-KSQEAGTKSYPRLLAYRFRAYEAVYNAYYRDIRNNPFVVNGR 360
Query 430 VQYNKWIPTYDGGADQNIYELRYANWEKDFLTTAVQSPQQGT-APLVGIttytetvettS 488
YNKW+PT GGAD+ +Y+L NWE+DFLTTAV +PQQG APLVG+T S
Sbjct 361 PVYNKWLPTMKGGADETMYQLHQCNWERDFLTTAVPNPQQGANAPLVGLTVGDVVTR--S 418
Query 489 DDGTPVTRELSRIALVDEDGKKYQVSF--DSDSEGLKGVSYVELDNEVKLRQPRNLIDVV 546
+DGT ++ + LVDEDG KY +S+ D E L GV Y + + + + ++
Sbjct 419 EDGTLSVQK--QTVLVDEDGSKYGISYKVSEDGERLVGVDYDPVSEKTPVTAINSYAELA 476
Query 547 T------SGISINDLRNVNAYQKFLELNMRKGYSYRDIIEGRFNVKVRYDELLMPEFFGG 600
SG +I LR VNAYQKFLELNMRKG+SY+ I++GR+++ +R+DELLMPEF GG
Sbjct 477 ALATEQGSGFTIETLRYVNAYQKFLELNMRKGFSYKQIMQGRWDIDIRFDELLMPEFIGG 536
Query 601 FSRDIEMHSISQTVDQDLDGSQ-TYAKALGSQSGIAGVRGDSGRALECFCDEESIVMGIL 659
SR++ M ++ QTVDQ SQ YA+ALGS++GIAGV G + +E FCDEES ++G+L
Sbjct 537 ISRELSMRTVEQTVDQQSASSQGQYAEALGSKTGIAGVYGSTSNNIEVFCDEESYIIGLL 596
Query 660 IVTPLPVYTQLLPKHFTYRGLLDHYQPEFNHIGFQPILYKEVCPLQAYSDGPDTLSDVFG 719
VTP+P+Y+QLLPK FTY GLLDHYQPEF+ IGFQPI YKEVCPL + ++ FG
Sbjct 597 TVTPVPIYSQLLPKDFTYNGLLDHYQPEFDRIGFQPITYKEVCPLNFDISNMNDMNKTFG 656
Query 720 YNRPWYEYVQKYDQAHGLFRTNLSNFLMHRVFNQKPQLAQSFLVIDPAQVTDVFAVTKAD 779
Y RPWYEYV KYD AHGLFRT+L F+MHR F+ PQL Q FL++DP V VF+V
Sbjct 657 YQRPWYEYVAKYDNAHGLFRTDLKKFVMHRTFSGLPQLGQQFLLVDPDTVNQVFSV---- 712
Query 780 DGTELADKIYGQIWFDCTAKLPISRVAIPRLD 811
TE DKI+G + F+ TA+LPISRVAIPRLD
Sbjct 713 --TEYTDKIFGYVKFNATARLPISRVAIPRLD 742
Score = 190 bits (483), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 102/130 (78%), Gaps = 1/130 (1%)
Query 1 MANGAFDATLDVNNEIKVNNFDWSHANNLTTQIGRVTPVFCELVPAHGSVRINPRFGLQF 60
MA FDAT D NN I VN+FDWSH NNLTT GR+TPVFCELVPA GS+RINP FGL+
Sbjct 1 MAQNIFDATFDANNRIDVNSFDWSHVNNLTTDFGRITPVFCELVPAKGSLRINPEFGLEL 60
Query 61 MPMVFPIQTRLRARMMFFKYPLRALWDGYRDFIGNFREDLEEPYLDLNTVTRLDAMAKTG 120
MPMVFP+QTR+ AR+ FFK LR++W+ Y DFI NFR+DLEEPY++ + ++ M TG
Sbjct 61 MPMVFPVQTRMFARLNFFKVTLRSMWEDYSDFISNFRDDLEEPYINCSEIS-FPKMFTTG 119
Query 121 SLGDYLGLPT 130
SLGDYLG+PT
Sbjct 120 SLGDYLGVPT 129
> Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1
Length=522
Score = 131 bits (329), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 164/384 (43%), Gaps = 21/384 (5%)
Query 400 ISAYSFRAYEGIYNAYIRDNRNNPYYVNGQVQYNKWIPTYDGGADQNIYELRYANWEKDF 459
+SA F AY+ IY+ Y RD + +V T G + +R W+ D+
Sbjct 133 VSALPFAAYQKIYDDYYRDEN-----LIDKVDITLSDGTQSGADAIELGTMRKRAWQHDY 187
Query 460 LTTAVQSPQQGTAPLVGIttytetvettSDDGTPVTRELSR---IALVDEDGKKYQVSFD 516
T+A+ Q+G + + T + + + R + IA DG +
Sbjct 188 FTSALPWTQRGPEATIPLGTSAPITWSNNTATATIVRNNTSGNPIAGYTFDGASALYTGG 247
Query 517 SDSEGLKGVSYVELDNEVKLRQPRNLIDVVTSGISINDLRNVNAYQKFLELNMRKGYSYR 576
S + V LD + +L S SINDLR Q++LE N R G Y
Sbjct 248 SGQLIADLPTPVSLDFDNSDHLFADLAGATAS--SINDLRRAFRLQEWLERNARGGARYI 305
Query 577 DIIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDGSQTYAKALGSQSGIAG 636
+II F V+ L PEF GG + I + + QT + T G+ +G G
Sbjct 306 EIIMAHFGVRSSDARLQRPEFLGGSATPITISEVLQT-----SANNTEPTPQGNMAG-HG 359
Query 637 VRGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQPEFNHIGFQPI 696
V S + C+E ++GI+ V P Y Q +PKHF D+Y P F +IG QPI
Sbjct 360 VSVGSSNYVSYKCEEHGYIIGIMSVMPKTAYQQGIPKHFKKLDKFDYYWPSFANIGEQPI 419
Query 697 LYKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFLMHRVFNQKPQ 756
L +E+ Y T ++ FGY + EY HG FR +L + M R+F KP
Sbjct 420 LNEEL-----YHQNNATDTETFGYTPRYAEYKYIPSTVHGEFRDSLDFWHMGRIFGSKPT 474
Query 757 LAQSFLVIDPAQVTDVFAVTKADD 780
L Q F+ + V VFAVT +
Sbjct 475 LNQDFIECNADDVERVFAVTAGQE 498
Score = 62.4 bits (150), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 2/115 (2%)
Query 17 KVNNFDWSHANNLTTQIGRVTPV-FCELVPAHGSVRINPRFGLQFMPMVFPIQTRLRARM 75
+ N FD SH + +IG + P+ E VP I +F P++ PI +
Sbjct 13 QTNTFDLSHDRKFSGKIGELMPITVMEAVPGD-KFNIKATNLTRFAPLITPIMHQASVYC 71
Query 76 MFFKYPLRALWDGYRDFIGNFREDLEEPYLDLNTVTRLDAMAKTGSLGDYLGLPT 130
FF P R LW + DFI + L +P +T G+L DYLGLPT
Sbjct 72 HFFFVPNRILWSNWEDFISGGEDGLADPTFPTINITTPTNGYAVGALADYLGLPT 126
Score = 27.7 bits (60), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 0/53 (0%)
Query 100 LEEPYLDLNTVTRLDAMAKTGSLGDYLGLPTTLFGKFGTTLSVATTGHIFGLK 152
L E N T + T +Y +P+T+ G+F +L G IFG K
Sbjct 420 LNEELYHQNNATDTETFGYTPRYAEYKYIPSTVHGEFRDSLDFWHMGRIFGSK 472
> Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1
Length=505
Score = 130 bits (326), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 171/385 (44%), Gaps = 41/385 (11%)
Query 400 ISAYSFRAYEGIYNAYIRDNR---NNPY-YVNGQVQYNKWIPTYDGGADQNIYELRYANW 455
+SA F AY+ +YN + RD PY +NG N+ +R +
Sbjct 134 VSALPFAAYQCVYNEWYRDQNLVAEVPYQLINGP------------NPRTNLAVMRLRAF 181
Query 456 EKDFLTTAVQSPQQGTAPLVGIttytetvettSDDGTPVTRELSRIALVDEDGKKYQVSF 515
E D+ T+A+ Q+G A + + T + D P E+ VS
Sbjct 182 EHDYFTSALPFAQKGNAVDIPLGDITLNSDWYLDGSVPKL----------ENSTGGYVSG 231
Query 516 DSDSEGLKGVSYVELDNEVKLRQPRNLIDVVTSGISINDLRNVNAYQKFLELNMRKGYSY 575
+ S+ G V DN+ P ++V ++ +I DLR Q++LEL R G Y
Sbjct 232 NVTSDNATGEINVGSDNDPFAYDPDGSLEVTST--TITDLRRAFKLQEWLELLARGGSRY 289
Query 576 RDIIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDGSQTYAKALGSQSGIA 635
+ I+ F+VK L PE+ G + + + I T +T G+ SG
Sbjct 290 IEQIKTFFDVKSSDQRLQRPEYITGTKQPVIISEILNTT------GETAGLPQGNMSG-H 342
Query 636 GVRGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQPEFNHIGFQP 695
GV +G + +C+E ++GIL VTP Y Q +PKH+ D Y P+F HIG QP
Sbjct 343 GVAVGTGNVGKYYCEEHGFIIGILSVTPNTAYQQGIPKHYLRTDKYDFYWPQFAHIGEQP 402
Query 696 ILYKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFLMHRVFNQKP 755
I+ E+ Y+ P T + FGY + EY + G FR++L + R+F+ P
Sbjct 403 IVNNEI-----YAYDP-TGDETFGYTPRYAEYKYMPSRVAGEFRSSLDEWHAARIFSSLP 456
Query 756 QLAQSFLVIDPAQVTDVFAVTKADD 780
L+Q F+ +D +FAVT DD
Sbjct 457 TLSQDFIEVDADDFDRIFAVTDGDD 481
Score = 55.8 bits (133), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (48%), Gaps = 6/119 (5%)
Query 17 KVNNFDWSHANNLTTQIGRVTPVF-CELVPAHGSVRINPRFGLQFMPMVFPIQTRLRARM 75
+ N FD +H ++ ++G + P+ E +P ++ + ++F P++ P+ R M
Sbjct 16 RYNTFDLTHDVKMSGRMGELLPIMNLECIPGD-NITLGADSMVKFAPLLAPVMHRFNVTM 74
Query 76 MFFKYPLRALWDGYRDFIGNFREDLEEPYLDLNTVTRLDAMAKTGSLGDYLGLPTTLFG 134
+F P R +WDG+ DF+ + P +++N+ A DYLG+P G
Sbjct 75 HYFFVPNRIIWDGWEDFMTDVDTPPAFPIIEVNS----GWTAAQQRFADYLGIPPNTAG 129
> Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1
Length=503
Score = 124 bits (310), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 186/424 (44%), Gaps = 59/424 (14%)
Query 397 QIKISAYSFRAYEGIYNAYIRDNRNNPYYVNGQVQYNKWIPTYDGGADQNIY-ELRYANW 455
Q++I+A F AY+ IYN Y RD + V YN DG + LR +
Sbjct 129 QVQINALPFAAYQAIYNEYYRDEN-----LVTAVNYN----LADGNQGIGTFGTLRKRAY 179
Query 456 EKDFLTTAVQSPQQGTA---PLVGIttytetvettSDDGTP--VTRELSRIALVD--EDG 508
E D+ T + Q+G A PL +T + P V + I +D + G
Sbjct 180 EHDYFTACLPFAQKGAAVDLPLGDVTLKANW----NPSAIPKFVNAAGTSINNLDDVQGG 235
Query 509 KKYQVSFDSDSEGLKGVSYVELDNEVKLRQPRNLIDVVTSGISINDLRNVNAYQKFLELN 568
++ S G ++Y P ++V ++ +INDLR Q+FLE N
Sbjct 236 TPNRIR---TSGGQSPIAY----------NPNGSLEVGST--TINDLRRAMRLQEFLEKN 280
Query 569 MRKGYSYRDIIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVD--QDLDGSQTYAK 626
R G Y + I+ F V+ L PE+ G + + I+ TV ++ G+ T K
Sbjct 281 ARGGTRYIENIKMHFGVQSSDSRLQRPEYITGTKAPVVVQEITSTVKGIEEPQGNPT-GK 339
Query 627 ALGSQSGIAGVRGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQP 686
A QSG G +E ++GI+ + P P Y Q +PK + +LD Y P
Sbjct 340 ATSLQSGHYG---------NYSVEEHGYIIGIMSIMPKPAYQQGIPKSYLKTDVLDFYWP 390
Query 687 EFNHIGFQPILYKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFL 746
F +IG Q +L +E+ Y+ P+ VFGY + EY ++ GLFRT L +
Sbjct 391 SFANIGEQEVLQEEI---YGYTPTPNA---VFGYIPRYAEYKYLQNRVCGLFRTTLDFWH 444
Query 747 MHRVFNQKPQLAQSFLVIDPAQVTDVFAVTKADDGTELADKIYGQIWFDCTAKLPISRVA 806
+ R+F P L+QSF+ + PA T +FA + D D IY + TA+ P+
Sbjct 445 LGRIFANIPTLSQSFIEVSPANQTRIFANQEDYD-----DNIYIHVLNKMTARRPMPVFG 499
Query 807 IPRL 810
P L
Sbjct 500 TPML 503
Score = 44.3 bits (103), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query 19 NNFDWSHANNLTTQIGRVTPV-FCELVPAHGSVRINPRFGLQFMPMVFPIQTRLRARMMF 77
N FD +H +T +G + P E VP I+ L+F P+ PI + + +
Sbjct 16 NTFDLTHDVKMTGGMGNLMPCCIAECVPGD-KWNISGDTYLRFAPITAPIMHSIDVAIHY 74
Query 78 FKYPLRALWDGYRDFIGNFREDLEEPYLDLNTVT---RLDAMAKTGSLGDYLGLP 129
F P R LW + FI N EP + T + + A AK LGDYL +P
Sbjct 75 FFVPNRILWSNWEKFIVN------EPTGGIPTFSWDANIPATAK--KLGDYLSVP 121
> Pichovirinae_Pavin_723_Microviridae_AG0327_putative.VP1
Length=508
Score = 120 bits (301), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/413 (27%), Positives = 173/413 (42%), Gaps = 46/413 (11%)
Query 400 ISAYSFRAYEGIYNAYIRD-NRNNPYYVNGQVQYNKWIPTYDGGADQNIYELRYANWEKD 458
+SA AY+ IYN Y RD N P + D G + + LR WE D
Sbjct 135 VSALPMAAYQCIYNEYYRDQNLQTPV----DYKLTDGNNNTDAGDRERLTTLRQRAWEHD 190
Query 459 FLTTAVQSPQQGTA---PLVGIttytetvettSDDGTPVTRELSRIALVDEDGKKYQVSF 515
+ T ++ Q+G A P+ I + + G R S L+D
Sbjct 191 YFTASLPFAQKGAAVDIPIGTIDKDVAVNFNSLEFGATTVRYNSADGLID---------- 240
Query 516 DSDSEGLKGVSYVELDNEVKLRQPRNLIDVVTSGISINDLRNVNAYQKFLELNMRKGYSY 575
+ G + V D + + ID+ + +INDLR Q++LE N R G Y
Sbjct 241 ------IGGSNAVNADGTPTMIAKTSTIDIEPT--TINDLRRAFKLQEWLEKNARGGTRY 292
Query 576 RDIIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDGSQTYAKALGSQSGIA 635
+ I F V+ L PE+ G + + + T QD Q G+ +G
Sbjct 293 IENILTHFGVRSSDKRLQRPEYITGVKSPVVVSEVLNTTGQDGGLPQ------GNMAG-H 345
Query 636 GVRGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQPEFNHIGFQP 695
G+ SG++ +C+E ++GI+ V P Y Q +P+ F LD++ P F +IG Q
Sbjct 346 GISVTSGKSGSYYCEEHGYIIGIMSVMPKTAYQQGIPRTFLKTDSLDYFWPTFANIGEQE 405
Query 696 ILYKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFLMHRVFNQKP 755
+ +E L AY+ + D FGY + EY + G FRT+L+ + + R+F +P
Sbjct 406 VAKQE---LYAYTANAN---DTFGYVPRYAEYKYMPSRVAGEFRTSLNYWHLGRIFATEP 459
Query 756 QLAQSFLVIDPAQVTDVFAVTKADDGTELADKIYGQIWFDCTAKLPISRVAIP 808
L F+ DP + +FAV + D +Y + A P+ + P
Sbjct 460 SLNSDFIECDPTK--RIFAVEDPE-----TDVLYCHVLNKIKAVRPMPKYGTP 505
Score = 63.5 bits (153), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 5/130 (4%)
Query 14 NEIKVNNFDWSHANNLTTQIGRVTPVFC-ELVPAHGSVRINPRFGLQFMPMVFPIQTRLR 72
N+ K N FD +H L+T +G++TP+ E VP ++ ++F PM+ P+ R+
Sbjct 12 NKPKKNVFDLTHDVKLSTNMGQLTPILTLECVPGD-KFDLSCESLIRFAPMIAPVMHRMD 70
Query 73 ARMMFFKYPLRALWDGYRDFIGNFREDLEEPYLDLNTVTRLDAMAKTGSLGDYLGLPTTL 132
M +F P R LW + FI + PY+ T D A DY+G+P
Sbjct 71 VTMHYFFVPNRILWSNWEKFITEHNSEHVAPYM---AYTNGDYTAMQKKFMDYIGIPPVP 127
Query 133 FGKFGTTLSV 142
G T +S
Sbjct 128 AGGVSTNVSA 137
> Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1
Length=518
Score = 114 bits (286), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 201/467 (43%), Gaps = 65/467 (14%)
Query 363 SGAQAHYYLTSDKPVDL-TLGSSPYYNSGSANKDKQIKISAYSFRAYEGIYNAYIRDNRN 421
S +A Y+ D+ +++ TLG Y S + D +K S AY+ I++ Y RD
Sbjct 98 SDVEAPYFNFIDQGIEVGTLGDHLGYPLSSVSSD--VKASPMPLAAYQKIWDEYYRDQ-- 153
Query 422 NPYYVNGQVQYNKWIPTYDGGADQNI---YELRYANWEKDFLTTAVQSPQQGTAPLVGIt 478
+Q ++ P G + + + W D+ T+ + Q+G + + I+
Sbjct 154 -------NLQDERFTPLVPGDNNSQLALNQQCYRRAWMHDYFTSCLPFAQKGDSVQLPIS 206
Query 479 tytetvettSDDGT-PVTRELS---------RIALVDEDGKKYQVSFDSDSEGLKGVSYV 528
+ + T P T L+ + +++ Q D D
Sbjct 207 SAENQIVQLDPTATAPGTFVLADGQASATPGNVHIINGPPPYVQTVVDDD---------- 256
Query 529 ELDNEVKLRQPRN--LIDVVTSGISINDLRNVNAYQKFLELNMRKGYSYRDIIEGRFNVK 586
DN ++ +PR ++DV + IN +R Q++LE N R G Y + I F V+
Sbjct 257 --DNPLQF-EPRGSLVVDVQADAVDINTVRRAFRLQEWLEKNARAGTRYIESILSHFGVR 313
Query 587 VRYDELLMPEFFGGFSRDI---EMHSISQTVDQDLDGSQTYAKALGSQSGIAGVRGDSGR 643
L PE+ GG ++ E+ + ++T D ++ A+G+ +G G+ G
Sbjct 314 SSDARLQRPEYLGGTKGNMVISEVLATAETTDANV--------AVGTMAG-HGITAHGGN 364
Query 644 ALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQPEFNHIGFQPILYKEVCP 703
++ C+E ++GI+ V P+ Y Q LP+ F+ LD+ P F +IG Q + KE
Sbjct 365 TIKYRCEEHGWIIGIINVQPVTAYQQGLPREFSRFDRLDYPWPVFANIGEQEVYNKE--- 421
Query 704 LQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFLMHRVFNQKPQLAQSFLV 763
L A S PD ++FGY + E K + G R L + + R+FN P L + F+
Sbjct 422 LYANSPAPD---EIFGYIPRYAEMKFKNSRVAGEMRDTLDFWHLGRIFNNTPALNEEFIE 478
Query 764 IDPAQVTDVFAVTKADDGTELADKIYGQIWFDCTAKLPISRVAIPRL 810
+P T +FAVT + D I I+ + T + R IP +
Sbjct 479 CNPD--TRIFAVTDPAE-----DHIVAHIYNEVTVNRKLPRYGIPTI 518
Score = 59.7 bits (143), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 8/119 (7%)
Query 14 NEIKVNNFDWSHANNLTTQIGRVTPV-FCELVPAHGSVRINPRFGLQFMPMVFPIQTRLR 72
+++ NNFD SH + ++G++ P E +P I P+ L+F+P++ P+ R+
Sbjct 15 SKVDSNNFDLSHDVKSSFKMGQLVPTNVIECMPG-DLFTIRPQNMLRFLPLIAPVMHRVE 73
Query 73 ARMMFFKYPLRALWDGYRDFIGNFREDLEEPYLDLNTVTRLDAMAKTGSLGDYLGLPTT 131
+F P R LW + +I D+E PY + +D + G+LGD+LG P +
Sbjct 74 VTTHYFFVPNRLLWADWEKWITG-ESDVEAPYFNF-----IDQGIEVGTLGDHLGYPLS 126
> Gokush_gi|12085136|ref|NP_073538.1|_major_capsid_protein_[Bdellovibrio_phage_phiMH2K]
Length=533
Score = 111 bits (277), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 180/432 (42%), Gaps = 36/432 (8%)
Query 384 SPYYNSGSANKDKQIKISAYSFRAYEGIYNAYIRDNRNNPYYVNGQVQYNKWIPTYDGGA 443
S Y + G + ++I+A FRAY IYN + RD + G++ +P DG
Sbjct 125 SIYDHFGIPTQVANLEINALPFRAYNLIYNDWFRDQN-----LIGKIA----VPKGDGPD 175
Query 444 DQNIYELRYANWEKDFLTTAVQSPQQGTAPLVGIttytetvettSDDGTPVTR--ELSRI 501
+ Y+L A D+ T+A+ PQ+G A + I + P +
Sbjct 176 NHADYQLLKAAKPHDYFTSALPWPQKGMAVEMPIGNSAPITYVPNAGNGPYPHFNWVQTP 235
Query 502 ALVDEDGKKYQVSFDSDSEGLKGVSYVELDNEVKLRQPRNLIDVVT-SGISINDLRNVNA 560
+G QV+F G K +S D Q + D+ + + +IN LR
Sbjct 236 GGPGNNGALSQVTFG----GQKAISAAGNDPIGYDPQGTLIADLSSATAATINQLRQAMM 291
Query 561 YQKFLELNMRKGYSYRDIIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDG 620
Q LEL+ R G Y +I++ FNV L PE+ G + D++ + + QT D
Sbjct 292 MQSLLELDARGGTRYVEILKSHFNVISLDFRLQRPEYLSGGTIDLQQNPVPQTSSSTTDS 351
Query 621 SQTYAKALGSQSGIAGVRGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGL 680
Q A + S G S + F E V+G + Y Q L K ++ +
Sbjct 352 PQGNLAAFSTASEFGNKIGFS----KSFV-EHGYVLGFIRARGQVTYQQGLHKMWSRQTR 406
Query 681 LDHYQPEFNHIGFQPILYKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRT 740
D + P+F +G Q IL KE+ Y+ G T S++FGY + EY + + G FR+
Sbjct 407 WDFFWPKFQELGEQAILNKEI-----YAQGNATDSEIFGYQERYGEYRFRPSEIKGQFRS 461
Query 741 NLSNFL----MHRVFNQKPQLAQSFLVIDPAQVTDVFAVTKADDGTELADKIYGQIWFDC 796
N + L + F KP L ++F+ + + VT+ D + G WFD
Sbjct 462 NFAESLDVWHLAEYFTVKPSLNKTFIESN-TPIERSLVVTRPD-----YPDLIGDFWFDY 515
Query 797 TAKLPISRVAIP 808
T P+ +P
Sbjct 516 THVRPMVTYGVP 527
Score = 41.2 bits (95), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/114 (22%), Positives = 50/114 (44%), Gaps = 0/114 (0%)
Query 19 NNFDWSHANNLTTQIGRVTPVFCELVPAHGSVRINPRFGLQFMPMVFPIQTRLRARMMFF 78
+ F+ S T + +TP+F + + ++ +N + ++ V P+ R+ FF
Sbjct 23 SKFNRSFGTKDTFKFDDLTPIFIDEILPGDTINMNTKTFIRLATQVVPVMDRMMLDFYFF 82
Query 79 KYPLRALWDGYRDFIGNFREDLEEPYLDLNTVTRLDAMAKTGSLGDYLGLPTTL 132
P R +WD + F G + + T+T + S+ D+ G+PT +
Sbjct 83 FVPCRLVWDNWEKFNGAQDNPSDSTDYLIPTITAPAGGFENMSIYDHFGIPTQV 136
> Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1
Length=518
Score = 108 bits (269), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/473 (26%), Positives = 197/473 (42%), Gaps = 57/473 (12%)
Query 348 TNSFTIRVSDFDLAGSGAQAHYYLTS-----DKPVDLTLGSSPYYNSGSANKDKQIKISA 402
T + ++ F L S A +++ S P LT + PY G+ Q+ S
Sbjct 93 TGNLDVQAPWFRLFPSPASGGFHVKSLADYLGYPTLLTPNAIPYPEPGA-----QVG-SP 146
Query 403 YSFRAYEGIYNAYIRDNRNNPYYVNGQVQYNKWIPTYDGGAD--QNIYE--LRYANWEKD 458
+ AY IYN Y RD +Q DG D +N+ ++ W+ D
Sbjct 147 FPVAAYNKIYNEYYRDQ---------NLQSPVLDSLTDGENDPFRNLAAGPVKKRAWQHD 197
Query 459 FLTTAVQSPQQGTAPLVGIttytetvettSDDGTPVTRELSRIALVDEDGKKYQ-VSFDS 517
+ T+ + Q+G A V I T+ + G V R++ +++ Y
Sbjct 198 YFTSCLPWAQKGDA--VTIPIGDVTINYNAAAGGTVMRQVDGTPYINQTDLNYSDAGGQP 255
Query 518 DSEGLKGVSYVELDNEVKLRQPRNLIDVVTSGISINDLRNVNAYQKFLELNMRKGYSYRD 577
+ G+ G Y +DN +L D IN LR Q++LE N R G Y +
Sbjct 256 RAGGVTGTRY-NIDNSSQLSGTAEAAD-------INSLRRAFRLQEWLERNARGGTRYIE 307
Query 578 IIEGRFNVKVRYDELLMPEFFGGFSRDIEMHSISQTVDQDLDGSQTYAKALGSQSGIAGV 637
I F VK L PE+ GG + + + T + L +G+ +G G+
Sbjct 308 SILAHFGVKSSDARLQRPEYLGGSKGKMVISEVLSTAETTL--------PVGNMAG-HGI 358
Query 638 RGDSGRALECFCDEESIVMGILIVTPLPVYTQLLPKHFTYRGLLDHYQPEFNHIGFQPIL 697
G + +E ++GI+ VTP Y Q + + + LD++ P F +IG Q +L
Sbjct 359 SVSGGNEFKYNVEEHGWIIGIISVTPETAYQQGIHRSLSKLDRLDYFWPTFANIGEQEVL 418
Query 698 YKEVCPLQAYSDGPDTLSDVFGYNRPWYEYVQKYDQAHGLFRTNLSNFLMHRVFNQKPQL 757
KE+ Y++G + + + FGY + EY + G RT+L + + R F+ P L
Sbjct 419 GKEI-----YANGIN-IGETFGYVPRYAEYKFLNSRVAGEMRTSLDYWHLGRKFSAAPNL 472
Query 758 AQSFLVIDPAQVTDVFAVTKADDGTELADKIYGQIWFDCTAKLPISRVAIPRL 810
+F+ DP+ T +FAV A+ D IYG I+ + A + + P
Sbjct 473 NGAFIECDPS--TRIFAVEDAE-----VDNIYGHIFNNIKAIRKMPKYGTPNF 518
Score = 51.2 bits (121), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (31%), Positives = 59/124 (48%), Gaps = 14/124 (11%)
Query 15 EIKVNNFDWSHANNLTTQIGRVTP-VFCELVPAHGSVRINPRFGLQFMPMVFPIQTRLRA 73
++ N FD SH ++ ++G + P E VP V+I L+F P++ P+ ++
Sbjct 14 KVGSNVFDLSHDVKMSFKMGGLYPTCVMECVPGD-KVKIGTETMLRFAPLIAPVMHKVNV 72
Query 74 RMMFFKYPLRALWDGYRDFI-GNFREDLEEPYLDLNTVTRLDAMAKTG----SLGDYLGL 128
+F P R LW + +I GN D++ P+ L + A G SL DYLG
Sbjct 73 TTHYFFVPNRILWPNWEQWITGNL--DVQAPWFRL-----FPSPASGGFHVKSLADYLGY 125
Query 129 PTTL 132
PT L
Sbjct 126 PTLL 129
Lambda K H a alpha
0.320 0.137 0.411 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 76249635