bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-6_CDS_annotation_glimmer3.pl_2_7
Length=67
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.pr... 76.6 9e-22
Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.p... 67.0 7e-18
Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.... 59.7 4e-15
Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.... 59.3 5e-15
Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p... 58.5 1e-14
Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.... 57.4 3e-14
Alpavirinae_Human_feces_A_032_Microviridae_AG0218_hypothetical.... 28.5 0.001
Microvirus_gi|242346743|ref|YP_002985205.1|_gpA*_[Enterobacteri... 22.3 0.39
Microvirus_gi|242346742|ref|YP_002985204.1|_DNA_replication_ini... 22.3 0.44
Microvirus_gi|89888662|ref|YP_512409.1|_gpA_[Enterobacteria_pha... 22.3 0.46
> Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.protein
Length=52
Score = 76.6 bits (187), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 2/54 (4%)
Query 14 LISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQTTRQSVDSTRIDVQPNF 67
+I+TFIIG+ITAL +QSCTASMSVFWKN NS Q+SQQTT+Q VDS I+ P+F
Sbjct 1 MIATFIIGVITALTVQSCTASMSVFWKNQNSKQDSQQTTQQKVDSVTIN--PHF 52
> Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.protein
Length=64
Score = 67.0 bits (162), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 29/55 (53%), Positives = 43/55 (78%), Gaps = 0/55 (0%)
Query 8 WIEVVKLISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQTTRQSVDSTRID 62
W E++++I T + L+TAL QSCTA+MSVFWKN+NS Q+S+Q+T +DS +I+
Sbjct 6 WKEIIRIIVTVLTALLTALGAQSCTATMSVFWKNANSQQKSEQSTTSKIDSIKIE 60
> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67
Score = 59.7 bits (143), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/67 (54%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+QSCT S+SV N NS Q+++QT+ SVDST+
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNQNSTQKTEQTSTSSVDSTK 60
Query 61 IDVQPNF 67
I++ P +
Sbjct 61 ININPKY 67
> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68
Score = 59.3 bits (142), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 51/65 (78%), Gaps = 0/65 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+QSCT S+SV N+N++Q+++QTT SVDST
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTTTSSVDSTH 60
Query 61 IDVQP 65
I++ P
Sbjct 61 ININP 65
> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68
Score = 58.5 bits (140), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 52/65 (80%), Gaps = 0/65 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+QSCT S+SV N+N++Q+++QT+ S+DST+
Sbjct 1 MKITGNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTSTSSIDSTK 60
Query 61 IDVQP 65
I++ P
Sbjct 61 ININP 65
> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65
Score = 57.4 bits (137), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 50/63 (79%), Gaps = 0/63 (0%)
Query 1 MKITPQQWIEVVKLISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQTTRQSVDSTR 60
MKIT QW+E+++ IST II +IT LC+QSCT S+SV NSNS Q+++QT+ SVDST+
Sbjct 1 MKITSNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVSKNNSNSTQKTEQTSTSSVDSTK 60
Query 61 IDV 63
I++
Sbjct 61 INI 63
> Alpavirinae_Human_feces_A_032_Microviridae_AG0218_hypothetical.protein
Length=66
Score = 28.5 bits (62), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (54%), Gaps = 2/56 (4%)
Query 13 KLISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQ--TTRQSVDSTRIDVQPN 66
KL+ ++ I A + C S+++ NSNS+Q+ Q + Q DST +++ N
Sbjct 11 KLMRLVMLAWIIAATLGGCVISLNIQKNNSNSDQKVDQNASANQENDSTNFNIKSN 66
> Microvirus_gi|242346743|ref|YP_002985205.1|_gpA*_[Enterobacteria_phage_St-1]
Length=323
Score = 22.3 bits (46), Expect = 0.39, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 29 QSCTASMSVFWKNSNSNQESQQ 50
QS ASM+V KN + + E++Q
Sbjct 279 QSSIASMTVTLKNGDISDEARQ 300
> Microvirus_gi|242346742|ref|YP_002985204.1|_DNA_replication_initiation_protein_gpA_[Enterobacteria_phage_St-1]
Length=494
Score = 22.3 bits (46), Expect = 0.44, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 29 QSCTASMSVFWKNSNSNQESQQ 50
QS ASM+V KN + + E++Q
Sbjct 450 QSSIASMTVTLKNGDISDEARQ 471
> Microvirus_gi|89888662|ref|YP_512409.1|_gpA_[Enterobacteria_phage_WA13_sensu_lato]
Length=494
Score = 22.3 bits (46), Expect = 0.46, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 29 QSCTASMSVFWKNSNSNQESQQ 50
QS ASM+V KN + + E++Q
Sbjct 450 QSSIASMTVTLKNGDISDEARQ 471
Lambda K H a alpha
0.319 0.126 0.369 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3642139