bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-11_CDS_annotation_glimmer3.pl_2_3

Length=362
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|547226428|ref|WP_021963491.1|  putative uncharacterized protein    49.7    0.002
gi|647452992|ref|WP_025792810.1|  hypothetical protein                42.4    0.43
gi|494610273|ref|WP_007368519.1|  hypothetical protein                42.0    0.61


>gi|547226428|ref|WP_021963491.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
 gi|524103380|emb|CCY83991.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=416

 Score = 49.7 bits (117),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 59/214 (28%), Positives = 95/214 (44%), Gaps = 35/214 (16%)

Query  114  LQAFRPDFSDV-GSalasmaqaraaminaEQNAAL----------TPYKMQQIL------  156
            +QAFRPDFS V G     +       +   Q  +L            YK +++L      
Sbjct  148  MQAFRPDFSGVTGIIQTLLDIQAQKGVRDAQAFSLGEQASGFKIENKYKAEKLLWDIYNS  207

Query  157  -GDTNYRNIGVGQSGYWTASTGRRSALL--DQSKEYQELKNMEFAGRL----TSAQEAQI  209
              D N +N    Q      S  R  A+   D SK  +E +N +F G L    T+ Q+ Q 
Sbjct  208  KADYNLKN---SQESLNNMSFARLQAMFSSDVSKAQREAENAQFTGELIRAQTACQQLQG  264

Query  210  LLDSEAQQVLNKYLDEQQQADLFIKGQTLSNLYAQGSLTEAQYKTEMAKAVKTAAETNGI  269
            LL ++      KY D++   +L I      +L A G  +EAQ +  +  A+    +  GI
Sbjct  265  LLGAKEL----KYYDQKVLQELAIMSAQQYSLVAAGKASEAQARQAIENALNLVEQREGI  320

Query  270  RINNKIASQTADSLIYANIQSNRARGLSSLWDSK  303
            +++N +  +TA++L    I++ R    +S W+SK
Sbjct  321  KVDNYVKQKTANAL----IKTARNNCNTSYWNSK  350


>gi|647452992|ref|WP_025792810.1| hypothetical protein [Prevotella histicola]
Length=424

 Score = 42.4 bits (98),  Expect = 0.43, Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 34/57 (60%), Gaps = 4/57 (7%)

Query  35  KTNQTSIDINRENNAFNAHQAQIQRDWQEKMWGMNNSYNSPNAMISR----GLNPFV  87
           KTNQT++ I RE N  N    Q    + EKM+   N+YN+P+A + R    G+NP++
Sbjct  28  KTNQTNLQIARETNQMNYQLFQESNAFNEKMYHEANAYNTPSAQMQRYAEAGINPYI  84


>gi|494610273|ref|WP_007368519.1| hypothetical protein [Prevotella multiformis]
 gi|324988545|gb|EGC20508.1| hypothetical protein HMPREF9141_0987 [Prevotella multiformis 
DSM 16608]
Length=437

 Score = 42.0 bits (97),  Expect = 0.61, Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (56%), Gaps = 4/59 (7%)

Query  33   QNKTNQTSIDINRENNAFNAHQAQIQRDWQEKMWGMNNSYNSPNAMISR----GLNPFV  87
            Q++ N+T++ I RE N       Q Q  + E+MW   N YNSP A + R    G+NP++
Sbjct  93   QDRANETNLQIAREANQNQYQMFQEQNAFNERMWNQMNQYNSPAAQMQRYTDAGINPYI  151



Lambda      K        H        a         alpha
   0.311    0.126    0.352    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2185514288406