bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-20_CDS_annotation_glimmer3.pl_2_7
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
gi|492501782|ref|WP_005867318.1| hypothetical protein 79.3 4e-13
gi|649557305|gb|KDS63784.1| capsid family protein 75.1 2e-12
gi|547920049|ref|WP_022322420.1| capsid protein VP1 76.6 4e-12
gi|649569140|gb|KDS75238.1| capsid family protein 74.7 1e-11
gi|649555287|gb|KDS61824.1| capsid family protein 74.3 2e-11
gi|547312923|ref|WP_022044635.1| putative uncharacterized protein 72.0 6e-11
gi|609718276|emb|CDN73650.1| conserved hypothetical protein 71.6 2e-10
gi|639237429|ref|WP_024568106.1| hypothetical protein 69.7 7e-10
gi|599087551|gb|AHN52701.1| major capsid protein 57.4 2e-06
gi|599088027|gb|AHN52939.1| major capsid protein 57.0 3e-06
>gi|492501782|ref|WP_005867318.1| hypothetical protein [Parabacteroides distasonis]
gi|409230408|gb|EKN23272.1| hypothetical protein HMPREF1059_03257 [Parabacteroides distasonis
CL09T03C24]
Length=538
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 22/266 (8%)
Query 77 IDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGG 133
++V ++++ L + + R A SG Y + I + V ++D R + P + GG
Sbjct 289 VNVDELGVSINDLRTSNALQRWFERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGG 346
Query 134 FSSEIIFQEVISNSATEN-EPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRID 192
+ I EV+ SAT++ P +AG G + G+ G K +E YIIGI+SI PR
Sbjct 347 GRTPISVSEVLQTSATDSTSPQANMAGHGISAGVNHG-FKRYFEEHGYIIGIMSIRPRTG 405
Query 193 YSQGNRFDVDLDTLD--DLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPA 250
Y QG D D D + P +G Q++ ++ + +G + G P
Sbjct 406 YQQG--VPKDFRKFDNMDFYFPEFAHLGEQEIKNEEVYLQQTPASNNG-----TFGYTPR 458
Query 251 WLDYMTNYNKVFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLN 310
+ +Y + N+V G+F + + F LNR + N + TT+++ N VFA +
Sbjct 459 YAEYKYSMNEVHGDF--RGNMAFWHLNRIFSESPNLN----TTFVECNPSNRVFATAETS 512
Query 311 AMNFWVQLGIGAKVRRKMSAKVIPNL 336
+W+QL K R M P L
Sbjct 513 DDKYWIQLYQDVKALRLMPKYGTPML 538
>gi|649557305|gb|KDS63784.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649559156|gb|KDS65543.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 6]
Length=245
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/244 (28%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query 99 LNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGGFSSEIIFQEVISNSATEN-EPL 154
R A SG Y + I + V ++D R + P + GG + I EV+ S+T++ P
Sbjct 18 FERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQ 75
Query 155 GTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDVDLDTLD--DLHKP 212
+AG G + G+ G + +E YI+GI+SI PR Y QG D D D + P
Sbjct 76 ANMAGHGISAGVNHGFTRY-FEEHGYIMGIMSIRPRTGYQQG--VPKDFRKFDNMDFYFP 132
Query 213 ALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNKVFGNFAIKDSEM 272
+G Q++ ++ + +G + G P + +Y + N+V G+F + +
Sbjct 133 EFAHLGEQEIKNEELYLNESDAANEG-----TFGYTPRYAEYKYSQNEVHGDF--RGNMA 185
Query 273 FMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGIGAKVRRKMSAKV 332
F LNR ++ N + TT+++ N VFA + +WVQ+ K R M
Sbjct 186 FWHLNRIFKEKPNLN----TTFVECNPSNRVFATAETSDDKYWVQIYQDIKALRLMPKYG 241
Query 333 IPNL 336
P L
Sbjct 242 TPML 245
>gi|547920049|ref|WP_022322420.1| capsid protein VP1 [Parabacteroides merdae CAG:48]
gi|524592961|emb|CDD13573.1| capsid protein VP1 [Parabacteroides merdae CAG:48]
Length=553
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/269 (27%), Positives = 117/269 (43%), Gaps = 18/269 (7%)
Query 72 NEITAIDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQT---VYTNDYIERSETP 128
N ++V + ++ L + + R A G Y + I + V ++D R + P
Sbjct 299 NGTLKVNVDEMGININDLRTSNALQRWFERNARGGSRYIEQILSHFGVRSSD--ARLQRP 356
Query 129 VYEGGFSSEIIFQEVISNSAT-ENEPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSI 187
+ GG I EV+ S+T E P +AG G + G+ G K +E YIIGI+SI
Sbjct 357 QFLGGGRMPISVSEVLQTSSTDETSPQANMAGHGISAGINNG-FKHYFEEHGYIIGIMSI 415
Query 188 TPRIDYSQGNRFDVDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGK 247
TPR Y QG D D + P + Q++ ++ ++ D + G
Sbjct 416 TPRSGYQQGVPRDFTKFDNMDFYFPEFAHLSEQEIKNQEL-----FVSEDAAYNNGTFGY 470
Query 248 QPAWLDYMTNYNKVFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADT 307
P + +Y + ++ G+F + + F LNR +E N + TT+++ + N VFA +
Sbjct 471 TPRYAEYKYHPSEAHGDF--RGNLSFWHLNRIFEDKPNLN----TTFVECKPSNRVFATS 524
Query 308 SLNAMNFWVQLGIGAKVRRKMSAKVIPNL 336
FWVQ+ K R M P L
Sbjct 525 ETEDDKFWVQMYQDVKALRLMPKYGTPML 553
>gi|649569140|gb|KDS75238.1| capsid family protein, partial [Parabacteroides distasonis str.
3999B T(B) 6]
Length=390
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/244 (28%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query 99 LNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGGFSSEIIFQEVISNSATEN-EPL 154
R A SG Y + I + V ++D R + P + GG + I EV+ S+T++ P
Sbjct 163 FERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQ 220
Query 155 GTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDVDLDTLD--DLHKP 212
+AG G + G+ G + +E YI+GI+SI PR Y QG D D D + P
Sbjct 221 ANMAGHGISAGVNHGFTRY-FEEHGYIMGIMSIRPRTGYQQG--VPKDFRKFDNMDFYFP 277
Query 213 ALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNKVFGNFAIKDSEM 272
+G Q++ ++ + +G + G P + +Y + N+V G+F + +
Sbjct 278 EFAHLGEQEIKNEELYLNESDAANEG-----TFGYTPRYAEYKYSQNEVHGDF--RGNMA 330
Query 273 FMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGIGAKVRRKMSAKV 332
F LNR ++ N + TT+++ N VFA + +WVQ+ K R M
Sbjct 331 FWHLNRIFKEKPNLN----TTFVECNPSNRVFATAETSDDKYWVQIYQDIKALRLMPKYG 386
Query 333 IPNL 336
P L
Sbjct 387 TPML 390
>gi|649555287|gb|KDS61824.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649560568|gb|KDS66876.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649561020|gb|KDS67307.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649562724|gb|KDS68908.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 6]
Length=541
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/244 (28%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query 99 LNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGGFSSEIIFQEVISNSATEN-EPL 154
R A SG Y + I + V ++D R + P + GG + I EV+ S+T++ P
Sbjct 314 FERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQ 371
Query 155 GTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDVDLDTLD--DLHKP 212
+AG G + G+ G + +E YI+GI+SI PR Y QG D D D + P
Sbjct 372 ANMAGHGISAGVNHGFTRY-FEEHGYIMGIMSIRPRTGYQQG--VPKDFRKFDNMDFYFP 428
Query 213 ALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNKVFGNFAIKDSEM 272
+G Q++ ++ + +G + G P + +Y + N+V G+F + +
Sbjct 429 EFAHLGEQEIKNEELYLNESDAANEG-----TFGYTPRYAEYKYSQNEVHGDF--RGNMA 481
Query 273 FMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGIGAKVRRKMSAKV 332
F LNR ++ N + TT+++ N VFA + +WVQ+ K R M
Sbjct 482 FWHLNRIFKEKPNLN----TTFVECNPSNRVFATAETSDDKYWVQIYQDIKALRLMPKYG 537
Query 333 IPNL 336
P L
Sbjct 538 TPML 541
>gi|547312923|ref|WP_022044635.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
gi|524208404|emb|CCZ76639.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
Length=338
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 133/336 (40%), Gaps = 54/336 (16%)
Query 45 GLALKTYQSDIFNNWINTEWLDGEGGINEITA-----IDVSSG-SLTMDTLNLAKKVYDM 98
GL Y D+F N I G EI +++S+G S+ + L L K+ +
Sbjct 11 GLLSVPYSPDLFGNIIK----QGSSPAVEIEVMNALDLNISTGFSVAVPELRLRTKIQNW 66
Query 99 LNRIAVSGGTYQDWIQTVY-TNDYIERSETPVYEGGFSSEIIFQEVISNSATENEPLGTL 157
++R+ VSGG D +T++ T P + G ++Q I+ S G+
Sbjct 67 MDRLFVSGGRVGDVFRTLWGTKSSAIYVNKPDFLG------VWQASINPSNVRAMANGSA 120
Query 158 AGRGQNTGMKGGTVKIKID------------EPSYIIGIVSITPRIDYSQGNRFDVDLDT 205
+G N G V D EP + I + P YSQG D+ +
Sbjct 121 SGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLITMLVPEPAYSQGLHPDLASIS 180
Query 206 LDDLHKPALDAIGFQDLTTNKMA-----------------WWDETITAD-GEKQLKSVGK 247
D P L+ IGFQ + ++ + W+ T T + + SVG+
Sbjct 181 FGDDFNPELNGIGFQLVPRHRFSMMPRGFNFTGLDQEASPWFGHTGTGVLVDPNMVSVGE 240
Query 248 QPAWLDYMTNYNKVFGNFAIKDSEMFMTLNRN---YEMDENKSIAD----LTTYIDPEKY 300
+ AW T+Y+++ G+FA + + L R Y D+ TYI+P +
Sbjct 241 EVAWSWLRTDYSRLHGDFAQNGNYQYWVLTRRFTTYFPDDGTGFYQDGEYTGTYINPLDW 300
Query 301 NYVFADTSLNAMNFWVQLGIGAKVRRKMSAKVIPNL 336
YVF D +L A NF V +SA +P L
Sbjct 301 QYVFVDQTLMAGNFAYYGTFDLNVTSSLSANYMPYL 336
>gi|609718276|emb|CDN73650.1| conserved hypothetical protein [Elizabethkingia anophelis]
Length=537
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/252 (29%), Positives = 112/252 (44%), Gaps = 20/252 (8%)
Query 85 TMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVY---TNDYIERSETPVYEGGFSSEIIFQ 141
T++ L A K+ + L + A +G Y + I + + T+D R + P + GG S I+
Sbjct 290 TVNDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSD--GRLQRPEFLGGNKSPIMIS 347
Query 142 EVISNSATENE-PLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFD 200
EV+ SAT++ P G +AG G G GG + +E Y+IG++S+ P+ YSQG
Sbjct 348 EVLQQSATDSTTPQGNMAGHGIGIGKDGGFSRF-FEEHGYVIGLMSVIPKTSYSQGIPRH 406
Query 201 VDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNK 260
D P + IG Q + NK + D E G P + +Y + +
Sbjct 407 FSKSDKFDYFWPQFEHIGEQPV-YNKEIFAKNIDAFDSEAVF---GYLPRYSEYKFSPST 462
Query 261 VFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFA---DTSLNAMNFWVQ 317
V G+F KD F L R ++ D+ + D + +FA DT F+
Sbjct 463 VHGDF--KDDLYFWHLGRIFDTDKPPVLNQSFIECDKNALSRIFAVEDDTD----KFYCH 516
Query 318 LGIGAKVRRKMS 329
L +RKMS
Sbjct 517 LYQKITAKRKMS 528
>gi|639237429|ref|WP_024568106.1| hypothetical protein [Elizabethkingia anophelis]
Length=546
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 122/261 (47%), Gaps = 23/261 (9%)
Query 77 IDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVY---TNDYIERSETPVYEGG 133
+ +SGS T++ L A K+ + L + A +G Y + I + + T+D R + P + GG
Sbjct 292 LKTASGS-TINDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSD--GRLQRPEFLGG 348
Query 134 FSSEIIFQEVISNSATENE-PLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRID 192
+ I+ EV+ S+T++ P G +AG G + G +GG K +E Y+IG++S+ P+
Sbjct 349 NKTPILISEVLQQSSTDSTTPQGNMAGHGISVGKEGGFSKF-FEEHGYVIGLMSVIPKTS 407
Query 193 YSQG-NRFDVDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKS---VGKQ 248
YSQG R D D P + IG Q + +++ I A S G
Sbjct 408 YSQGIPRHFSKFDKFDYFW-PQFEHIGEQPV-------YNKEIFAKNVGDYDSGGVFGYV 459
Query 249 PAWLDYMTNYNKVFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTS 308
P + +Y + + + G+F KD+ F L R ++ + ++ + +FA
Sbjct 460 PRYSEYKYSPSTIHGDF--KDTLYFWHLGRIFDSSAPPKLNRDFIEVNKSGLSRIFA-VE 516
Query 309 LNAMNFWVQLGIGAKVRRKMS 329
N+ F+ L +RKMS
Sbjct 517 DNSDKFYCHLYQKITAKRKMS 537
>gi|599087551|gb|AHN52701.1| major capsid protein, partial [uncultured Gokushovirinae]
Length=220
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query 83 SLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVY-TNDYIERSETPVYEGGFSSEIIFQ 141
+ T++ L A ++ +L R A G Y + IQ + R + P Y GG ++ II
Sbjct 75 AATINQLRQAFQIQKLLERDARGGTRYTEIIQAHFGVTSPDARLQRPEYLGGGTTPIIIS 134
Query 142 EVISNSATENEPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDV 201
+V S ++ P GTLA G T K G K E IIG+ S+ + Y QG
Sbjct 135 QVPQTSESDGTPQGTLAAYGTATMRKAGFTK-SFTEHCVIIGLASVRADLTYQQGLERMW 193
Query 202 DLDTLDDLHKPALDAIGFQ 220
T D++ PAL IG Q
Sbjct 194 SRQTRYDVYWPALAMIGEQ 212
>gi|599088027|gb|AHN52939.1| major capsid protein, partial [uncultured Gokushovirinae]
Length=219
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (47%), Gaps = 3/158 (2%)
Query 67 GEGGI--NEITAIDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVYTNDYIER 124
G+ G+ N++ A + + T++ L A ++ +L R A SG Y + ++ + ++++
Sbjct 57 GDAGVQANQLYADLSQATAATINQLRQAFQIQKLLERDARSGTRYAEIVKAHFGVNFMDV 116
Query 125 SETPVYEGGFSSEIIFQEVISNSATENEPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGI 184
+ P + GG S+ I V S + P GTLA G T GG K E ++GI
Sbjct 117 TYRPEFLGGTSTPINVTSVPQTSESGTTPQGTLAAFGTATVNGGGFTK-SFTEHCIVMGI 175
Query 185 VSITPRIDYSQGNRFDVDLDTLDDLHKPALDAIGFQDL 222
S+ + Y QG T D + PAL IG Q +
Sbjct 176 ASVRADLTYQQGLNRMFSRSTRYDFYFPALAHIGEQAV 213
Lambda K H a alpha
0.314 0.132 0.385 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1938212634900