bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-24_CDS_annotation_glimmer3.pl_2_1
Length=647
Score E
Sequences producing significant alignments: (Bits) Value
gi|547312923|ref|WP_022044635.1| putative uncharacterized protein 63.5 2e-07
gi|639237429|ref|WP_024568106.1| hypothetical protein 59.3 5e-06
gi|444298000|dbj|GAC77839.1| major capsid protein 59.3 6e-06
gi|649569140|gb|KDS75238.1| capsid family protein 58.2 9e-06
gi|649555287|gb|KDS61824.1| capsid family protein 58.5 9e-06
gi|649557305|gb|KDS63784.1| capsid family protein 56.2 2e-05
gi|492501782|ref|WP_005867318.1| hypothetical protein 57.4 2e-05
gi|444298142|dbj|GAC77768.1| major capsid protein 56.2 3e-05
gi|609718276|emb|CDN73650.1| conserved hypothetical protein 55.1 1e-04
gi|599088023|gb|AHN52937.1| major capsid protein 50.4 0.001
>gi|547312923|ref|WP_022044635.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
gi|524208404|emb|CCZ76639.1| putative uncharacterized protein [Alistipes finegoldii CAG:68]
Length=338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 110/271 (41%), Gaps = 53/271 (20%)
Query 357 CPSSPDRFSRLMPPGDSNS---------DVDF-TGVK-TIPQLAVATRLQEYKDLIGASG 405
P SPD F ++ G S + D++ TG +P+L + T++Q + D + SG
Sbjct 15 VPYSPDLFGNIIKQGSSPAVEIEVMNALDLNISTGFSVAVPELRLRTKIQNWMDRLFVSG 74
Query 406 SRYSDWLYTFFASKIE--HVDRPKLLFSSSVMVNSQVVLNQAGQSGFEGGESAALGQMGG 463
R D T + +K +V++P L +N V +A +G GE A LGQ+
Sbjct 75 GRVGDVFRTLWGTKSSAIYVNKPDFLGVWQASINPSNV--RAMANGSASGEDANLGQLAA 132
Query 464 SIS----FNTVLGREQTYYFKEPG--YIFDMMTIRPVYFWTGIRPDYLEYRGPDYFNPIY 517
+ F+ G + YY KEPG + M+ P Y G+ PD D FNP
Sbjct 133 CVDRYCDFSGHSGID--YYAKEPGTFMLITMLVPEPAYS-QGLHPDLASISFGDDFNPEL 189
Query 518 NDIGYQDVPLWRL-----GYG----------WKADTVSS-------LSVAKEPCYNEFRS 555
N IG+Q VP R G+ W T + +SV +E ++ R+
Sbjct 190 NGIGFQLVPRHRFSMMPRGFNFTGLDQEASPWFGHTGTGVLVDPNMVSVGEEVAWSWLRT 249
Query 556 SYDEVLGSLQATLTPKASTPLQSYWVQQRDF 586
Y + G A YWV R F
Sbjct 250 DYSRLHGDF-------AQNGNYQYWVLTRRF 273
>gi|639237429|ref|WP_024568106.1| hypothetical protein [Elizabethkingia anophelis]
Length=546
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 113/272 (42%), Gaps = 35/272 (13%)
Query 373 SNSDVDFTGVK--TIPQLAVATRLQEYKDLIGASGSRYSDWLYTFFASKIE--HVDRPKL 428
SN VD TI L A +LQE+ + +GSRY++ + +FF K + RP+
Sbjct 286 SNLGVDLKTASGSTINDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSDGRLQRPEF 345
Query 429 LFSSSVMVNSQVVLNQAGQ-----SGFEGGESAALGQMGGSISFNTVLGREQTYYFKEPG 483
L + + VL Q+ G G ++G+ GG F F+E G
Sbjct 346 LGGNKTPILISEVLQQSSTDSTTPQGNMAGHGISVGKEGGFSKF-----------FEEHG 394
Query 484 YIFDMMTIRP-VYFWTGIRPDYLEYRGPDYFNPIYNDIGYQDVPLWRLGYGWKADTVSSL 542
Y+ +M++ P + GI + ++ DYF P + IG Q V + D S
Sbjct 395 YVIGLMSVIPKTSYSQGIPRHFSKFDKFDYFWPQFEHIGEQPVYNKEIFAKNVGDYDSGG 454
Query 543 SVAKEPCYNEFRSSYDEVLGSLQATLTPKASTPLQSYWVQQRDFYLIGLSSNPNEVSPSM 602
P Y+E++ S + G + TL +W R F SS P +++
Sbjct 455 VFGYVPRYSEYKYSPSTIHGDFKDTLY---------FWHLGRIFD----SSAPPKLNRDF 501
Query 603 LFTNLNTVNNPFA-SDMEDNFFVNMSYKVVVK 633
+ N + ++ FA D D F+ ++ K+ K
Sbjct 502 IEVNKSGLSRIFAVEDNSDKFYCHLYQKITAK 533
>gi|444298000|dbj|GAC77839.1| major capsid protein [uncultured marine virus]
Length=480
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/276 (21%), Positives = 111/276 (40%), Gaps = 30/276 (11%)
Query 375 SDVDFTGVKTIPQLAVATRLQEYKDLIGASGSRYSDWL-YTFFASKIEHVDRPKLLFSSS 433
+D+ TI + A +Q Y++ GSRY+++L Y K + RP+ + +
Sbjct 228 ADLQAATGGTINDIRRAFAIQRYQEARSRYGSRYTEYLRYLGVNPKDARLQRPEYMGGGT 287
Query 434 VMVNSQVVLNQAGQSGFEGGESAALGQMGGSISFNTVLGREQTY--YFKEPGYIFDMMTI 491
+N VL + + G + + +G R Y Y +E GYI M+++
Sbjct 288 TQINFSEVLQTSPE--IPGEDQVSQFGVGDMYGHGIAAMRSNKYRRYIEEHGYIISMLSV 345
Query 492 RPVYFWT-GIRPDYLEYRGPDYFNPIYNDIGYQDVPLWRLGYGWKADTVSSLSVAKEPCY 550
RP +T GI +L DY+ IG Q++ + + + + + Y
Sbjct 346 RPKTMYTNGIHRSWLRLTKEDYYQKELEHIGQQEIMNNEI---YADEGAGTETFGYNDRY 402
Query 551 NEFRSSYDEVLGSLQATLTPKASTPLQSYWVQQRDFYLIGLSSNPNEVSPSM--LFTNLN 608
+E+R + V + L +YW R+F E P + F + +
Sbjct 403 SEYRETPSHVSAEFRGIL---------NYWHMAREF----------EAPPVLNQSFVDCD 443
Query 609 TVNNPFASDMEDNFFVNMSYKVVVKNLINKSFATRL 644
+D ++ + +K+V + L++++ A R+
Sbjct 444 ATKRIHNEQTQDALWIMIQHKMVARRLLSRNAAPRI 479
>gi|649569140|gb|KDS75238.1| capsid family protein, partial [Parabacteroides distasonis str.
3999B T(B) 6]
Length=390
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (42%), Gaps = 24/274 (9%)
Query 312 AHPYDVQEPKVDWNNGTGTDVNIPSKVYFSATLNVPFLAAHPMA---VCPSSPDRFS--- 365
A P+ + P+V G ++ + K F+A F P++ V S+P S
Sbjct 65 ALPWVQRGPEVTVPINGGGEIPVEMKEGFAAQKITTFPDRKPISGSEVLYSAPSVLSYGQ 124
Query 366 -------RLMPPGDSNSDVDFTGVKTIPQLAVATRLQEYKDLIGASGSRYSDWLYTFFA- 417
L+ P + + D GV I + + LQ + + SGSRY + + + F
Sbjct 125 IGSIKGQALIEPDNFVVNTDQMGV-NINDIRTSNALQRWFERNARSGSRYIEQILSHFGV 183
Query 418 -SKIEHVDRPKLLFSSSVMVNSQVVLNQAGQSGFEGGESAALGQMGGSISFNTVLGREQT 476
S + RP+ L ++ VL Q+ S G IS G T
Sbjct 184 RSSDARLQRPQFLGGGRTPISVSEVL----QTSSTDSTSPQANMAGHGISAGVNHGF--T 237
Query 477 YYFKEPGYIFDMMTIRP-VYFWTGIRPDYLEYRGPDYFNPIYNDIGYQDVPLWRLGYGWK 535
YF+E GYI +M+IRP + G+ D+ ++ D++ P + +G Q++ L Y +
Sbjct 238 RYFEEHGYIMGIMSIRPRTGYQQGVPKDFRKFDNMDFYFPEFAHLGEQEIKNEEL-YLNE 296
Query 536 ADTVSSLSVAKEPCYNEFRSSYDEVLGSLQATLT 569
+D + + P Y E++ S +EV G + +
Sbjct 297 SDAANEGTFGYTPRYAEYKYSQNEVHGDFRGNMA 330
>gi|649555287|gb|KDS61824.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649560568|gb|KDS66876.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649561020|gb|KDS67307.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649562724|gb|KDS68908.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 6]
Length=541
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (42%), Gaps = 24/274 (9%)
Query 312 AHPYDVQEPKVDWNNGTGTDVNIPSKVYFSATLNVPFLAAHPMA---VCPSSPDRFS--- 365
A P+ + P+V G ++ + K F+A F P++ V S+P S
Sbjct 216 ALPWVQRGPEVTVPINGGGEIPVEMKEGFAAQKITTFPDRKPISGSEVLYSAPSVLSYGQ 275
Query 366 -------RLMPPGDSNSDVDFTGVKTIPQLAVATRLQEYKDLIGASGSRYSDWLYTFFA- 417
L+ P + + D GV I + + LQ + + SGSRY + + + F
Sbjct 276 IGSIKGQALIEPDNFVVNTDQMGV-NINDIRTSNALQRWFERNARSGSRYIEQILSHFGV 334
Query 418 -SKIEHVDRPKLLFSSSVMVNSQVVLNQAGQSGFEGGESAALGQMGGSISFNTVLGREQT 476
S + RP+ L ++ VL Q+ S G IS G T
Sbjct 335 RSSDARLQRPQFLGGGRTPISVSEVL----QTSSTDSTSPQANMAGHGISAGVNHGF--T 388
Query 477 YYFKEPGYIFDMMTIRP-VYFWTGIRPDYLEYRGPDYFNPIYNDIGYQDVPLWRLGYGWK 535
YF+E GYI +M+IRP + G+ D+ ++ D++ P + +G Q++ L Y +
Sbjct 389 RYFEEHGYIMGIMSIRPRTGYQQGVPKDFRKFDNMDFYFPEFAHLGEQEIKNEEL-YLNE 447
Query 536 ADTVSSLSVAKEPCYNEFRSSYDEVLGSLQATLT 569
+D + + P Y E++ S +EV G + +
Sbjct 448 SDAANEGTFGYTPRYAEYKYSQNEVHGDFRGNMA 481
>gi|649557305|gb|KDS63784.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649559156|gb|KDS65543.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 6]
Length=245
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/188 (26%), Positives = 83/188 (44%), Gaps = 10/188 (5%)
Query 385 IPQLAVATRLQEYKDLIGASGSRYSDWLYTFFA--SKIEHVDRPKLLFSSSVMVNSQVVL 442
I + + LQ + + SGSRY + + + F S + RP+ L ++ VL
Sbjct 5 INDIRTSNALQRWFERNARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVL 64
Query 443 NQAGQSGFEGGESAALGQMGGSISFNTVLGREQTYYFKEPGYIFDMMTIRP-VYFWTGIR 501
Q+ S G IS G T YF+E GYI +M+IRP + G+
Sbjct 65 ----QTSSTDSTSPQANMAGHGISAGVNHGF--TRYFEEHGYIMGIMSIRPRTGYQQGVP 118
Query 502 PDYLEYRGPDYFNPIYNDIGYQDVPLWRLGYGWKADTVSSLSVAKEPCYNEFRSSYDEVL 561
D+ ++ D++ P + +G Q++ L Y ++D + + P Y E++ S +EV
Sbjct 119 KDFRKFDNMDFYFPEFAHLGEQEIKNEEL-YLNESDAANEGTFGYTPRYAEYKYSQNEVH 177
Query 562 GSLQATLT 569
G + +
Sbjct 178 GDFRGNMA 185
>gi|492501782|ref|WP_005867318.1| hypothetical protein [Parabacteroides distasonis]
gi|409230408|gb|EKN23272.1| hypothetical protein HMPREF1059_03257 [Parabacteroides distasonis
CL09T03C24]
Length=538
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/276 (24%), Positives = 118/276 (43%), Gaps = 30/276 (11%)
Query 368 MPPGDSNSDVDFTGVKTIPQLAVATRLQEYKDLIGASGSRYSDWLYTFFA--SKIEHVDR 425
+ P + +VD GV +I L + LQ + + SGSRY + + + F S + R
Sbjct 282 LEPDNFQVNVDELGV-SINDLRTSNALQRWFERNARSGSRYIEQILSHFGVRSSDARLQR 340
Query 426 PKLLFSSSVMVNSQVVLNQAGQSGFEGGESAALGQMGGSISFNTVLGREQTYYFKEPGYI 485
P+ L ++ VL Q+ S G IS G ++ YF+E GYI
Sbjct 341 PQFLGGGRTPISVSEVL----QTSATDSTSPQANMAGHGISAGVNHGFKR--YFEEHGYI 394
Query 486 FDMMTIRP-VYFWTGIRPDYLEYRGPDYFNPIYNDIGYQDVPLWRLGYGWKADTVSSLSV 544
+M+IRP + G+ D+ ++ D++ P + +G Q++ + Y + ++ +
Sbjct 395 IGIMSIRPRTGYQQGVPKDFRKFDNMDFYFPEFAHLGEQEIKNEEV-YLQQTPASNNGTF 453
Query 545 AKEPCYNEFRSSYDEVLGSLQATLTPKASTPLQSYWVQQRDFYLIGLSSNPNEVSPSMLF 604
P Y E++ S +EV G + + ++W R F S +PN + F
Sbjct 454 GYTPRYAEYKYSMNEVHGDFRGNM---------AFWHLNRIF-----SESPNL---NTTF 496
Query 605 TNLNTVNNPFAS--DMEDNFFVNMSYKVVVKNLINK 638
N N FA+ +D +++ + V L+ K
Sbjct 497 VECNPSNRVFATAETSDDKYWIQLYQDVKALRLMPK 532
>gi|444298142|dbj|GAC77768.1| major capsid protein [uncultured marine virus]
Length=299
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (27%), Positives = 70/153 (46%), Gaps = 6/153 (4%)
Query 375 SDVDFTGVKTIPQLAVATRLQEYKDLIGASGSRYSDWL-YTFFASKIEHVDRPKLLFSSS 433
+D+ G I L A LQ Y++ G+R++++L Y +S + RP+++ +
Sbjct 111 ADLSQAGAININDLREAFALQRYQEARNLYGARFTEYLRYLGISSSXGRLQRPEMISTGK 170
Query 434 VMVNSQVVLNQAGQSGFEGGESAALGQMGGSISFNTVLGREQTYYFKEPGYIFDMMTIRP 493
+N VLN G SG + LG+MGG V Y+ +E G+I +M++RP
Sbjct 171 SNINFSEVLNTTGPSGV---DDHPLGEMGGH-GIAGVKSNRARYFCEEHGHIISLMSVRP 226
Query 494 -VYFWTGIRPDYLEYRGPDYFNPIYNDIGYQDV 525
+ T + DY+ IG ++V
Sbjct 227 KTIYMTTQHKQFDRESKEDYWQKELQAIGMEEV 259
>gi|609718276|emb|CDN73650.1| conserved hypothetical protein [Elizabethkingia anophelis]
Length=537
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (42%), Gaps = 35/262 (13%)
Query 382 VKTIPQLAVATRLQEYKDLIGASGSRYSDWLYTFFASKIE--HVDRPKLLFSSSVMVNSQ 439
V T+ L A +LQE+ + +GSRY++ + +FF K + RP+ L + +
Sbjct 288 VSTVNDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSDGRLQRPEFLGGNKSPIMIS 347
Query 440 VVLNQAGQ-----SGFEGGESAALGQMGGSISFNTVLGREQTYYFKEPGYIFDMMTIRP- 493
VL Q+ G G +G+ GG + +F+E GY+ +M++ P
Sbjct 348 EVLQQSATDSTTPQGNMAGHGIGIGKDGGF-----------SRFFEEHGYVIGLMSVIPK 396
Query 494 VYFWTGIRPDYLEYRGPDYFNPIYNDIGYQDVPLWRLGYGWKADTVSSLSV-AKEPCYNE 552
+ GI + + DYF P + IG Q V + + D S +V P Y+E
Sbjct 397 TSYSQGIPRHFSKSDKFDYFWPQFEHIGEQPVYNKEI-FAKNIDAFDSEAVFGYLPRYSE 455
Query 553 FRSSYDEVLGSLQATLTPKASTPLQSYWVQQRDFYLIGLSSNPNEVSPSMLFTNLNTVNN 612
++ S V G + L +W R F + P ++ S + + N ++
Sbjct 456 YKFSPSTVHGDFKDDLY---------FWHLGRIFD----TDKPPVLNQSFIECDKNALSR 502
Query 613 PFA-SDMEDNFFVNMSYKVVVK 633
FA D D F+ ++ K+ K
Sbjct 503 IFAVEDDTDKFYCHLYQKITAK 524
>gi|599088023|gb|AHN52937.1| major capsid protein, partial [uncultured Gokushovirinae]
Length=213
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 41/154 (27%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query 375 SDVDFTGVKTIPQLAVATRLQEYKDLIGASGSRYSDWLYTFFASKIE--HVDRPKLLFSS 432
+D+ TI L +A + Q + G+RY++ + F + + RP+ +
Sbjct 62 ADLGDATAATINDLRLAFQTQRLLERDARGGTRYNELIRAHFGVTVPDFRIQRPEYIGGG 121
Query 433 SVMVNSQVVLNQAGQSGFEGGESAALGQMGGSISFNTVLGREQTYYFKEPGYIFDMMTIR 492
S MVN V N AGQSG G+ A+G + GS + TY E G I + +R
Sbjct 122 SSMVNVTPVANTAGQSGDYVGQLGAMGTVSGS--------HDWTYSAVEHGVIIGLANVR 173
Query 493 -PVYFWTGIRPDYLEYRGPDYFNPIYNDIGYQDV 525
+ + G+ + + D++ P+ IG Q V
Sbjct 174 GDITYSQGLERYWSKSTRYDFYYPVLAQIGEQAV 207
Lambda K H a alpha
0.320 0.136 0.427 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4903549086528