bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-31_CDS_annotation_glimmer3.pl_2_5 Length=166 Score E Sequences producing significant alignments: (Bits) Value gi|575094355|emb|CDL65737.1| unnamed protein product 48.5 6e-04 gi|635343463|emb|CDQ28732.1| Dipeptide-binding protein DppE prec... 38.9 1.1 gi|544870878|ref|WP_021284234.1| hypothetical protein 38.1 2.2 gi|643731769|gb|KDP38961.1| hypothetical protein JCGZ_00718 36.6 6.9 >gi|575094355|emb|CDL65737.1| unnamed protein product [uncultured bacterium] Length=517 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 0/65 (0%) Query 16 CLRPRRVTNPYTADVLFSPcgccaacvankanvataYVQNMASYFKFCYFVTLTYADTFL 75 CL P+RV NPY D L PCG C AC +KA+ +Q AS KFC F TLTYA+T++ Sbjct 11 CLEPKRVFNPYLNDWLLVPCGKCRACQCSKASRYKLQIQLEASQHKFCIFGTLTYANTYI 70 Query 76 PMVDV 80 P + + Sbjct 71 PRLSL 75 >gi|635343463|emb|CDQ28732.1| Dipeptide-binding protein DppE precursor [Halobacillus trueperi] gi|635346794|emb|CDQ21028.1| Dipeptide-binding protein DppE precursor [Halobacillus dabanensis] gi|662981198|emb|CDQ24908.1| Dipeptide-binding protein DppE precursor [Halobacillus karajensis] Length=563 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Query 64 YFVTLTYADTFLPMVDVCAVERTGNRYLEYADTLLPSSDPRDLKEEWYHDRDLSLDSNEN 123 YF +LT TFLPM + VE G++Y ADTLL S+ P L EW H +L+ NE+ Sbjct 196 YFESLTTFGTFLPM-NQAFVEEHGDQYALEADTLL-SNGPFVLT-EWNHGEGWTLEKNED 252 >gi|544870878|ref|WP_021284234.1| hypothetical protein [Clostridium sp. BL8] gi|530689129|gb|EQB87274.1| hypothetical protein M918_09890 [Clostridium sp. BL8] Length=564 Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 31/60 (52%), Gaps = 3/60 (5%) Query 64 YFVTLTYADTFLPMVDVCAVERTGNRYLEYADTLLPSSDPRDLKEEWYHDRDLSLDSNEN 123 YF+ LTY F+P VE+ Y A TLL S P LKE W HD + L+ NEN Sbjct 183 YFMNLTYFTLFMPQRQD-MVEKNAKNYGADAGTLL-SCGPFKLKE-WVHDSKIVLEKNEN 239 >gi|643731769|gb|KDP38961.1| hypothetical protein JCGZ_00718 [Jatropha curcas] Length=806 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 41/84 (49%), Gaps = 7/84 (8%) Query 72 DTFLPMVDVCAVERTGNRYLEYADTLLPSSDPRDLKEEWYHDRDLSLDSNENLVRQQYEI 131 D ++ + D+ + +R L+ + LLP DP D E L +NE++V Q + Sbjct 576 DVYIDVPDIIDISHMRSRGLQPGEQLLPEGDPSDEVES------KQLVANEDIVSQLVSM 629 Query 132 GFKYVP-RKVSVKVKNSTVYRSFD 154 GF Y+ +K ++ N+ V + + Sbjct 630 GFNYLHCQKAAINTLNTGVEEAMN 653 Lambda K H a alpha 0.323 0.139 0.426 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 429014905530