bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-36_CDS_annotation_glimmer3.pl_2_4

Length=92
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|310722487|ref|YP_003969310.1|  unnamed protein product             35.8    0.68
gi|262263169|dbj|BAI48087.1|  kinetochore protein                     33.9    9.5


>gi|310722487|ref|YP_003969310.1| unnamed protein product [Aeromonas phage phiAS5]
 gi|306021330|gb|ADM79864.1| hypothetical protein phiAS5_ORF0021 [Aeromonas phage phiAS5]
Length=112

 Score = 35.8 bits (81),  Expect = 0.68, Method: Compositional matrix adjust.
 Identities = 17/40 (43%), Positives = 26/40 (65%), Gaps = 1/40 (3%)

Query  34  KSAISRAKETVANTDVAPAE-YQCVKKRKLENGYFYASVR  72
            S+I   KE +AN D  PAE ++C K+ ++ENG+ Y  V+
Sbjct  38  NSSIIGVKEIMANPDRTPAESHECWKRVQIENGWKYGEVK  77


>gi|262263169|dbj|BAI48087.1| kinetochore protein [Nicotiana sylvestris]
Length=246

 Score = 33.9 bits (76),  Expect = 9.5, Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 7/81 (9%)

Query  8    TKAMKVYQVLKVTKEGQYLVKTCPMLKSAISRAKETVANTDVAPAEYQCVKKRKLENGYF  67
            T+A+++YQ L V ++ + LV+T    ++ +    E +A   V  +E++  K+ +  NG  
Sbjct  162  TEALELYQQLAVDEKFEELVRTASGFQTKV----ENLATRMVENSEHRRAKRIRTSNGEM  217

Query  68   YASVRLMHDGYAIDAEIWKTQ  88
            +   RL +DG  + A + + Q
Sbjct  218  F---RLSNDGGLLSATLEELQ  235



Lambda      K        H        a         alpha
   0.317    0.129    0.370    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 435738179790