bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-4_CDS_annotation_glimmer3.pl_2_9

Length=196
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|360043474|emb|CCD78887.1|  putative cln3/battenin                  39.3    0.21
gi|629647156|ref|XP_007801519.1|  hypothetical protein EPUS_04232     36.6    9.4


>gi|360043474|emb|CCD78887.1| putative cln3/battenin [Schistosoma mansoni]
Length=92

 Score = 39.3 bits (90),  Expect = 0.21, Method: Compositional matrix adjust.
 Identities = 21/62 (34%), Positives = 33/62 (53%), Gaps = 9/62 (15%)

Query  135  DYSPDLPTM-MVLFYEGLLKYMKLCNAYYDSLPETSPLRKQLREMYPNLYVGGVSTISDE  193
             Y P +  M MV+FYEG L  +   N +Y+ L ETSP+ ++        Y   ++T+SD 
Sbjct  19   SYIPHIWIMFMVIFYEGCLGGLTYVNTFYNILQETSPIYRE--------YAMAMATVSDS  70

Query  194  VA  195
            + 
Sbjct  71   IG  72


>gi|629647156|ref|XP_007801519.1| hypothetical protein EPUS_04232 [Endocarpon pusillum Z07020]
 gi|539436725|gb|ERF72797.1| hypothetical protein EPUS_04232 [Endocarpon pusillum Z07020]
Length=602

 Score = 36.6 bits (83),  Expect = 9.4, Method: Composition-based stats.
 Identities = 16/35 (46%), Positives = 23/35 (66%), Gaps = 0/35 (0%)

Query  129  PGRISIDYSPDLPTMMVLFYEGLLKYMKLCNAYYD  163
            P R+SI+ SPD   + + F EGL++  +L  AYYD
Sbjct  207  PCRVSIEPSPDGAGLRICFQEGLIESRRLGGAYYD  241



Lambda      K        H        a         alpha
   0.328    0.143    0.418    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 599296957224