bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-11_CDS_annotation_glimmer3.pl_2_3

Length=362
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0987                                              65.1    6e-09


> 888743.HMPREF9141_0987
Length=437

 Score = 65.1 bits (157),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 87/328 (27%), Positives = 143/328 (44%), Gaps = 48/328 (15%)

Query  8    IAPLVLGGIIAAGASLAGNAIGSAS----QNKTNQTSIDINRENNAFNAHQAQIQRDWQE  63
            I P ++G  I+ G SL G   G  S    Q++ N+T++ I RE N       Q Q  + E
Sbjct  64   IDPSIIGSAISGGVSLLGGLFGGHSNKTAQDRANETNLQIAREANQNQYQMFQEQNAFNE  123

Query  64   KMWGMNNSYNSPNAMISR----GLNPFV------QGSAAMAGSRSPASGGAAASAASAPS  113
            +MW   N YNSP A + R    G+NP++       G+A  A   +PA     A    A  
Sbjct  124  RMWNQMNQYNSPAAQMQRYTDAGINPYIAAGNVQTGNAQSALQSAPAPQQHVAQVMPATG  183

Query  114  L-QAFRPDFSDVGSALASMAQARAAMINAEQNAALTPYKMQQILGDTNYRNIGVGQSGYW  172
            +  A +  F+ +G+ ++  AQ + A+  A++  A   +            +  +G+ G  
Sbjct  184  MGDAVQNSFAQIGNVISQFAQNQLALAQAKKTDAEASWI-------DRLNSAQMGKLGAE  236

Query  173  TASTGRRSALL--------DQSKEYQELKNME-----FAGRLTSAQEAQILLDSEAQQVL  219
            T +   +++LL        D    Y+ L ++          L  AQ  + L +S+   V 
Sbjct  237  TLNIHNQNSLLGLDYQIKSDTLGNYKLLSDLSVQQAALTNNLVDAQTRKALFESDLAMVE  296

Query  220  N----KYLDEQ--QQADLFIKGQTLSNLYAQGS--LTEAQYKTEMAKAVKTAAETNGIRI  271
            +    KY ++Q  Q+    +  Q L+ + A  S  LT AQ      +A     +  GIR+
Sbjct  297  SHIKAKYGEKQVLQEISESVSRQYLNYVSAHNSEKLTTAQCNLMFEQAKTEVEKRFGIRL  356

Query  272  NN----KIASQTADSLIY-ANIQSNRAR  294
            +N    KI++   DS    A I +N+AR
Sbjct  357  DNDTSRKISNFVVDSYHSNAKIDANQAR  384



Lambda      K        H        a         alpha
   0.310    0.124    0.342    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 666347610760