bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_3

Length=369
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0987                                              92.8    4e-18


> 888743.HMPREF9141_0987
Length=437

 Score = 92.8 bits (229),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 154/355 (43%), Gaps = 61/355 (17%)

Query  5    FDPLSLLSPGISAIGSIVGGLFG----KKGSDNAAKAQLQIARETNANNYRIAQENNAFN  60
             DP S++   IS   S++GGLFG    K   D A +  LQIARE N N Y++ QE NAFN
Sbjct  64   IDP-SIIGSAISGGVSLLGGLFGGHSNKTAQDRANETNLQIAREANQNQYQMFQEQNAFN  122

Query  61   ERMVDKMNDWNSAKNQRARLEEAGLNPYLMLDGGSAGTATT------APTADTSSVQSAP  114
            ERM ++MN +NS   Q  R  +AG+NPY+       G A +      AP    + V  A 
Sbjct  123  ERMWNQMNQYNSPAAQMQRYTDAGINPYIAAGNVQTGNAQSALQSAPAPQQHVAQVMPAT  182

Query  115  DVGSTIASGAQQLGSSISSAASQISQQVYNSSLQEANVRKANADAS-----SSEQDALLK  169
             +G  + +   Q+G+ IS        Q   + L  A  +K +A+AS     +S Q   L 
Sbjct  183  GMGDAVQNSFAQIGNVIS--------QFAQNQLALAQAKKTDAEASWIDRLNSAQMGKLG  234

Query  170  GIESQFAAQRFLLDLKLKEMQGKVSEQDYYYLRDSMQDRLDSVKFQNTLTGSQSSYYNQM  229
                    Q  LL L            DY    D+    L + K  + L+  Q++  N  
Sbjct  235  AETLNIHNQNSLLGL------------DYQIKSDT----LGNYKLLSDLSVQQAALTN--  276

Query  230  AGLVDVQ--RQIEKTNLDWLPREKQA--GLAATLQNVRTMVSQMHLNYAQAKNA------  279
              LVD Q  + + +++L  +    +A  G    LQ +   VS+ +LNY  A N+      
Sbjct  277  -NLVDAQTRKALFESDLAMVESHIKAKYGEKQVLQEISESVSRQYLNYVSAHNSEKLTTA  335

Query  280  -----YAMAALNYAQEAGVRLNNKLQDSIFDLSVGMAENQYEQGRADAAQHIFGF  329
                 +  A     +  G+RL+N     I +  V   ++ +   + DA Q    F
Sbjct  336  QCNLMFEQAKTEVEKRFGIRLDNDTSRKISNFVV---DSYHSNAKIDANQARISF  387



Lambda      K        H        a         alpha
   0.311    0.124    0.335    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 687453643680