bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_5

Length=623
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   310   7e-94


> 483216.BACEGG_02721
Length=578

 Score =   310 bits (795),  Expect = 7e-94, Method: Compositional matrix adjust.
 Identities = 219/631 (35%), Positives = 309/631 (49%), Gaps = 68/631 (11%)

Query  5    SNIMGLHGLKNKTSRNSFDLSHRNLFTAKVGELLPCFVQEVNPGDSIKLDSSYFTRTAPL  64
            +NIM L  ++NK SRN FDLS +  FTAK GELLP  V+EV PGD+ K++   FTRT P+
Sbjct  2    ANIMSLKSIRNKPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQPV  61

Query  65   QTAAFTRLRENVQYFFVPYQCLWKYFEGQVKNMTKNANGGDISQIATSPFANAKVSTEMP  124
             TAAF R+RE   +FFVPY  LW      +  M  N        ++  P  N  +S EMP
Sbjct  62   NTAAFARIREYYDFFFVPYDLLWNKANTVLTQMYDNPQHA----VSIDPTRNFVLSGEMP  117

Query  125  FISYTALHAYLNKLLNYVDSSANPTELSNPFLYNNGCWRHAESAKLLQLLGYGNFVQQFK  184
            +++  A+ +Y+N L     +SA     SN F YN    R   S KLL+ LGYGN+     
Sbjct  118  YMTSEAIASYINALST---ASALADYKSNYFGYN----RSKSSVKLLEYLGYGNYESFLT  170

Query  185  NFSASKPY--SLLHVENAPALSVFRLLAYQKICNDFYTYRQWQPYNASLCNIDYITPDSS  242
            +   + P   +L H       ++F LLAYQKI +DFY   QW+  + S  N+DY+     
Sbjct  171  DDWNTAPLMANLNH-------NIFGLLAYQKIYSDFYRDSQWERVSPSTFNVDYL---DG  220

Query  243  SSMDLSSKFSSISVSDLGKSNMLDMRFSNLPLDYFNGVLPTPQFGSESVVSLSQNADVYT  302
            SSM+L + +S+    +    N  D+R+ N   D F+GVLP  Q+G  +V S++   DV  
Sbjct  221  SSMNLDNAYSTEFYQNY---NFFDLRYCNWQKDLFHGVLPHQQYGETAVASIT--PDVTG  275

Query  303  GFDKSQWQTLDGSAFPSGSVSSSNSDRSLTANGKSIEHVHILPSGSITSSLSIAALRQAT  362
                S + T+  S                TA+G + ++   LP+      LSI  LRQA 
Sbjct  276  KLTLSNFSTVGTSP--------------TTASGTATKN---LPAFDTVGDLSILVLRQAE  318

Query  363  ALQKYKEIQLANDPDFESQIEAHFGIKPKHDMHK-SRFIGGSSSMIDINPVVNQNLGAGQ  421
             LQK+KEI  + + D++ Q+E H+G+       +   ++GG SS IDIN V+N N+    
Sbjct  319  FLQKWKEITQSGNKDYKDQLEKHWGVSVGDGFSELCTYLGGVSSSIDINEVINTNITGSA  378

Query  422  NQDNQAVTKAAPTGQGGASFKFTADTFGVVIGIYRCTPVLDYSHVGIDRTLLKTDASDFV  481
              D     K      G  +F  +   +G+++ IY C P+LDY+   +D   LK +++D+ 
Sbjct  379  AAD--IAGKGVGVANGEINFN-SNGRYGLIMCIYHCLPLLDYTTDMLDPAFLKVNSTDYA  435

Query  482  IPELDSIGMQQTFQCELFAPTSQMTASAPDKRKYDMSRTFGYAPRYSEYKVSFDRYNGAF  541
            IPE D +GMQ     +L  P      ++            GY PRY +YK S D+  G F
Sbjct  436  IPEFDRVGMQSMPLVQLMNPLRSFANAS--------GLVLGYVPRYIDYKTSVDQSVGGF  487

Query  542  CDTLKSWVTGF-NTHIFDSDRW-NDRSYFSISVP---------QLFVCRPDIVKDIFALQ  590
              TL SWV  + N  +       ND      S P           F   PD +  IFA+Q
Sbjct  488  KRTLNSWVISYGNISVLKQVTLPNDAPPIEPSEPVPSVAPMNFTFFKVNPDCLDPIFAVQ  547

Query  591  TYHDSNDDNLYVGMVNMCYATRNLSRYGLPY  621
               D+N D           A RNL   GLPY
Sbjct  548  AGDDTNTDQFLCSSFFDIKAVRNLDTDGLPY  578



Lambda      K        H        a         alpha
   0.318    0.132    0.394    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1402747247070