bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-13_CDS_annotation_glimmer3.pl_2_1

Length=298
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              48.9    8e-04


> 585502.HMPREF0645_1835
Length=553

 Score = 48.9 bits (115),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 65/276 (24%), Positives = 119/276 (43%), Gaps = 27/276 (10%)

Query  36   INAITAVDTSIGSFTMDTLNLAKKVYNMLNRIAVSDGTYKSWMETVFSAKYVERTETPI-  94
            +N     D+S G F++ +L  A  V  +L+    +  T++  M   +  +  +  +  + 
Sbjct  283  VNFGVDTDSSEGDFSVSSLRAAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVN  342

Query  95   YYGGMSQEIIFEEVVSTS---ATGEEP----LGTLAGKGRLAPNKKGGKVVIKIDEPSYI  147
            Y GG   ++   +V  TS   AT  +P    LG +AGKG        G++V    E   +
Sbjct  343  YLGGFDSDMQVSDVTQTSGTTATEYKPEAGYLGRVAGKGT---GSGRGRIVFDAKEHGVL  399

Query  148  IGICSITPRLDYSQGN-NFTMNWETMNDLHKPALDMIGYQDLTMEKAAWWTEEHTSDTEF  206
            + I S+ P++ Y     +  ++     D   P  + +G Q L    +++ +   T+D + 
Sbjct  400  MCIYSLVPQIQYDCTRLDPMVDKLDRFDYFTPEFENLGMQPL---NSSYISSFCTTDPK-  455

Query  207  AQKSIGKTVAWVDYMTNYNKNYGNFASGENENFMTLDRNY------NVENPDFTTYIDPA  260
                +G    + +Y T  + N+G FA  +  +  ++ R         +E  DF   IDP 
Sbjct  456  -NPVLGYQPRYSEYKTALDVNHGQFAQSDALSSWSVSRFRRWTTFPQLEIADFK--IDPG  512

Query  261  KYNGIF-ADQSRSSMNFWVQIGVNWKVRRKISAKSI  295
              N IF  D + +  N  V  G N+ +  K+S  S+
Sbjct  513  CLNSIFPVDYNGTEANDCVYGGCNFNI-VKVSDMSV  547



Lambda      K        H        a         alpha
   0.315    0.131    0.395    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 489563864000