bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_3

Length=680
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              85.1    1e-14


> 888743.HMPREF9141_0985
Length=531

 Score = 85.1 bits (209),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 82/318 (26%), Positives = 141/318 (44%), Gaps = 63/318 (20%)

Query  407  IDGTTGGINAITAVDVSD--GKLTMDALILQKKIFNMLNRVAITDGTYQAWREATYGIRS  464
            + G +  IN ++ + V+D      +D ++   +  N L+        Y +  EA +G R 
Sbjct  233  VSGASTFINGVSVLSVNDLRAAFALDKMLEATRRANGLD--------YSSQIEAHFGFR-  283

Query  465  TTLPESPI----FCGGMQSEIAFDEIVSNA----ATDEEP-LGTLAGRGVATMYKSGRGL  515
              +PES      F GG  + +   E+V+ +      DE P LG L G+GV ++  S    
Sbjct  284  --VPESRAGDARFIGGFDNPVVISEVVNQSEFDRGADESPCLGDLGGKGVGSLNSSSIDF  341

Query  516  KIKCTEPCMIMALGSITPRIDYSQGNKW--WTRLQNMDDFHKPTLDAIGFQELIAEE---  570
             +K  E  +IM + S+ P+ +Y+ G  +  + R    +DF +P    +G+Q ++  +   
Sbjct  342  DVK--EHGIIMCIYSVVPQTEYN-GTYFDPFNRKLRREDFFQPEFADLGYQPVVTSDLIS  398

Query  571  -----------------AAAWSTEAT-GNHELVYQSLGKQPSWIEYTTDVNETYGDFAAG  612
                             AA +   +   N+ L    LG Q  + EY T  +  +G+F +G
Sbjct  399  TYLDNPVPDGPEKQKRLAAGYPLSSIEANNRL----LGWQVRYNEYKTSRDLVFGEFESG  454

Query  613  MPLAFMCLNRVYE-----ENSDHTIAN-----ASTYIDPTIYNKIFAESRLSSQNFWVQV  662
            + L++ C  R Y+     +  D  + N     A  Y++P+I N IF  S + + +F V  
Sbjct  455  LSLSYWCSPR-YDFGFDGKAGDKKLVNSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNS  513

Query  663  AFDVTARRVMSAKQIPNL  680
             FDV A R MS   +  L
Sbjct  514  FFDVKAVRPMSVSGLAGL  531



Lambda      K        H        a         alpha
   0.317    0.132    0.396    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1559501704540