bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-1_CDS_annotation_glimmer3.pl_2_6

Length=367
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0987                                              44.3    0.036


> 888743.HMPREF9141_0987
Length=437

 Score = 44.3 bits (103),  Expect = 0.036, Method: Compositional matrix adjust.
 Identities = 51/172 (30%), Positives = 77/172 (45%), Gaps = 17/172 (10%)

Query  3    ALVTSAIIAGASGLAAA-GGSSIAASKMNSRAEKYNRWALKE--QQRYQKEYADYMAQLE  59
            +++ SAI  G S L    GG S   ++   RA + N    +E  Q +YQ      M Q +
Sbjct  67   SIIGSAISGGVSLLGGLFGGHSNKTAQ--DRANETNLQIAREANQNQYQ------MFQEQ  118

Query  60   AQQNNLYWDK---YNSPAAQRRARVAAGFTPYADVGGIQTSSVDPGSYGGSTPSAQSFTQ  116
               N   W++   YNSPAAQ +    AG  PY   G +QT +          P  Q   Q
Sbjct  119  NAFNERMWNQMNQYNSPAAQMQRYTDAGINPYIAAGNVQTGNAQSALQSAPAPQ-QHVAQ  177

Query  117  PGGIPSSPLVGAFGNATQQTLSALQAEANIELTKSQALKTRAETTGLENTNS  168
               +P++ +  A  N+  Q  + +   A  +L  +QA KT AE + ++  NS
Sbjct  178  V--MPATGMGDAVQNSFAQIGNVISQFAQNQLALAQAKKTDAEASWIDRLNS  227



Lambda      K        H        a         alpha
   0.311    0.123    0.331    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 681423348560